Lactobacillus backii TMW 1.2002 |
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Putative Lactobacillus backii TMW 1.2002 RM systems
Ref: Behr,J. et al. unpublished
REBASE ref # 22728
| Sequence length: | GenBank #: | |
| Chromosome: | 2,664,097 bp | CP014899 |
| plasmid pL12002-2: | 22,560 bp | CP014901 |
| plasmid pL12002-3: | 11,878 bp | CP014902 |
| plasmid pL12002-5: | 33,270 bp | CP014904 |
| plasmid pL12002-6: | 12,076 bp | CP014905 |
REBASE acronym: Lba2002
Org_num: 19771
All begin AYR56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7445 | 677 aa hypothetical protein | |||
| 7450 | R | Lba1989ORF9550P (100% identity) | Lba2002ORF7455P | |
| 7455 | M | M.Lba1989ORF9550P (100% identity) | M.Lba2002ORF7455P | |
| 7460 | S | S2.Lba1989ORF9550P (100% identity) | CAAYNNNNNNTTC | S1.Lba2002ORF7455P |
| 7465 | integrase | |||
| 7470 | transposase | |||
| 7475 | transposase | |||
| 7480 | 205 aa hypothetical protein | |||
| 7485 | S | S1.Lba1989ORF9550P (100% identity) | S2.Lba2002ORF7455P | |
| 7490 | flavin-nucleotide-binding protein | |||
| plasmid pL12002-2 | ||||
| 12460 | addiction module toxin RelE | |||
| 12465 | S | S.Lba1989I (100% identity) | RTTAYNNNNNNTATT | S.Lba2002II |
| 12470 | 195 aa hypothetical protein | |||
| plasmid pL12002-3 | ||||
| 12620 | RepB-like protein | |||
| 12625 | R | Lba1989IIIP (100% identity) | CAAYNNNNNNTTC | Lba2002IIIP |
| 12630 | M | M.Lba1989III (100% identity) | CAAYNNNNNNTTC | M.Lba2002III |
| 12635 | S | S.Lba1989III (100% identity) | CAAYNNNNNNTTC | S.Lba2002III |
| plasmid pL12002-5 | ||||
| 13010 | holin | |||
| 13015 | R | Lba1989IIP (100% identity) | AGGNNNNNNTGC | Lba2002IP |
| 13020 | M | M.Lba1989II (100% identity) | AGGNNNNNNTGC | M.Lba2002I |
| 13025 | S | S.Lba1989II (100% identity) | AGGNNNNNNTGC | S.Lba2002I |
| 13030 | 456 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5240 | 116 aa hypothetical protein | |||
| 5245 | M | M.Lba1989ORF11760P (100% identity) | M.Lba2002ORF5245P | |
| 5250 | 66 aa hypothetical protein | |||
| plasmid pL12002-6 | ||||
| 13125 | replication protein RepB | |||
| 13130 | RM | Lba1989ORF13145P (100% identity) | Lba2002ORF13130P | |