Putative Ralstonia solanacearum YC40-M RM systems
Ref: XiaoYing,L. et al. unpublished
REBASE ref # 22408
Sequence length: | GenBank #: | |
Chromosome: | 3,844,764 bp | CP015850 |
plasmid unnamed: | 1,907,366 bp | CP015851 |
REBASE acronym: RsoYC40
Org_num: 19867
All begin A3768_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
49 | Rrf2 family transcriptional regulator | |||
50 | M | M.Rsp647ORF17405P (100% identity) | M.RsoYC40ORF50P | |
51 | membrane protein | |||
52 | R | Rsp647ORF17405P (100% identity) | RsoYC40ORF50P | |
53 | histidine kinase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
12 | 492 aa hypothetical protein | |||
??? | V | V.RsoT82ORF50P (100% identity) | V.RsoYC40ORF13P | |
??? | M | M.RsoT12ORF50P (100% identity) | M.RsoYC40ORF13P | |
14 | 86 aa hypothetical protein | |||
233 | 38 aa hypothetical protein | |||
??? | M | site-specific DNA-methyltransferase | M1.RsoYC40ORF234P | |
235 | M | M2.RsoRSNORF1245P (100% identity) | M2.RsoYC40ORF234P | |
236 | 121 aa hypothetical protein | |||
256 | yopp/avrrxv family protein | |||
??? | M | M.RsoYQORF1280P (100% identity) | M.RsoYC40ORFBP | |
257 | tail length tape measure protein | |||
408 | Gene D protein | |||
409 | M | M.RsoFQY4ORF3074P (100% identity) | M.RsoYC40ORF409P | |
410 | 73 aa hypothetical protein | |||
1589 | tryptophan synthase subunit alpha | |||
1590 | M | M.Rsp647ORF10140P (100% identity) | M.RsoYC40ORF1590P | |
1591 | tryptophan synthase subunit alpha | |||
2707 | bacteriophage-related transmembrane protein | |||
??? | M | M.RsoWR1ORFFP (99% identity) | M.RsoYC40ORFAP | |
2708 | transposase TIS1021 | |||
2734 | 62 aa hypothetical protein | |||
2735 | M | M2.RsosSY1ORF11965P (97% identity) | M1.RsoYC40ORF2735P | |
2736 | M | M1.Rsp647ORF3870P (98% identity) | M2.RsoYC40ORF2735P | |
2737 | 66 aa hypothetical protein | |||
plasmid unnamed | ||||
5365 | 50 aa hypothetical protein | |||
??? | M | M2.Rso45F50ORFGP (86% identity) | M.RsoYC40ORF5366P | |
??? | 219 aa hypothetical protein | |||
??? | hypothetical protein | |||
??? | M | M.Rsp647ORF23515P (46% identity) | M.RsoYC40ORF5368P | |
5370 | transposase TIS1021 | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
27 | 85 aa hypothetical protein | |||
??? | R | RsoT02MrrP (100% identity) | RsoYC40MrrP | |
31 | 93 aa hypothetical protein |