Neisseria gonorrhoeae 34769 |
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Putative Neisseria gonorrhoeae 34769 RM systems
Ref: Bharat,A. unpublished
REBASE ref # 22735
Complete sequence: 2,220,340 bp
GenBank #: CP016017
REBASE acronym: Ngo34769
Org_num: 19886
All begin A9Y61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2125 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2130 | M | M.NgoWSII (100% identity) | M.Ngo34769ORF2130P | |
| 2135 | DNA damage-inducible protein D | |||
| 2140 | S | S.NgoNG290ORF2325P (100% identity) | S.Ngo34769ORF2130P | |
| 2145 | R | NgoWNIIP (100% identity) | Ngo34769ORF2130P | |
| 2150 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3640 | recombination factor protein RarA | |||
| 3645 | R | Ngo204IP (98% identity) | GAGNNNNNTAC | Ngo34769ORF3670P |
| 3650 | 77 aa hypothetical protein | |||
| 3655 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo34769ORF3670P |
| 3660 | 186 aa hypothetical protein | |||
| 3665 | 279 aa hypothetical protein | |||
| 3670 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo34769ORF3670P |
| 3675 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | leucine--tRNA ligase | |||
| 40 | R | NgoJH13ORFMP (87% identity) | GATC | Ngo34769ORF40P |
| 45 | DNA methyltransferase | |||
| 40 | restriction endonuclease | |||
| 45 | M | M.NgoJH13ORFLP (99% identity) | GATC | M.Ngo34769ORF45P |
| 50 | 0 aa hypothetical protein | |||
| 1585 | phenylalanine--tRNA ligase subunit alpha | |||
| 1590 | V | V.NgoWSORF391P (100% identity) | V.Ngo34769ORF1595P | |
| ??? | DNA -methyltransferase | |||
| 1605 | R | NgoJH13ORFRP (100% identity) | Ngo34769ORF1595P | |
| 1610 | phenylalanine--tRNA ligase subunit beta | |||
| 1590 | very short patch repair endonuclease | |||
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo34769ORF195P | |
| 1605 | restriction endonuclease | |||
| 1875 | 215 aa hypothetical protein | |||
| 1880 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo34769ORF1880P |
| 1885 | S | S.NgoFA19ORF100P (100% identity) | S.Ngo34769ORF1880P | |
| 1890 | 140 aa hypothetical protein | |||
| 1910 | uroporphyrinogen decarboxylase | |||
| 1915 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo34769ORF1925P | |
| 1920 | R | Ngos1291ORF7560P (100% identity) | Ngo34769ORF1925P | |
| 1925 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo34769ORF1925P |
| 1930 | 92 aa hypothetical protein | |||
| 3530 | 3-isopropylmalate dehydrogenase | |||
| 3535 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo34769ORF3540P |
| 3540 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo34769ORF3540P |
| 3545 | 3-isopropylmalate dehydratase small subunit | |||
| 4855 | anthranilate synthase component I | |||
| 4860 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo34769ORF4860P |
| 4865 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo34769ORF4860P |
| 4870 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6615 | excinuclease ABC subunit A | |||
| ??? | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo34769ORF6625P |
| 6625 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo34769ORF6625P |
| 6630 | transposase | |||
| 7130 | 0 aa hypothetical protein | |||
| 7135 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo34769ORF7145P | |
| 7140 | R | Ngos1291ORF65P (100% identity) | Ngo34769ORF7145P | |
| ??? | M | M.NgoWSORF1801P (100% identity) | CCGG | M.Ngo34769ORF7145P |
| 7155 | 48 aa hypothetical protein | |||
| 9855 | 375 aa hypothetical protein | |||
| 9860 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo34769ORF9865P |
| 9865 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo34769ORF9865P |
| 9870 | ribosome recycling factor | |||
| 10415 | 93 aa hypothetical protein | |||
| 10420 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo34769ORF10425P |
| 10425 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.Ngo34769ORF10425P |
| 10430 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.Ngo34769ORF10425P |
| 10435 | RNA-binding transcriptional accessory protein | |||
| 10990 | GTPase ObgE | |||
| 10995 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo34769ORF10995P |
| 11000 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo34769ORF10995P |
| 11005 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2840 | peptidylprolyl isomerase | |||
| ??? | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo34769ORF2845P |
| 2850 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo34769ORF2845P |
| 2855 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3335 | alpha-hydroxy-acid oxidizing enzyme | |||
| 3340 | R | NgoFA19ORF379P (100% identity) | Ngo34769ORF3345P | |
| ??? | M | M.Ngo6140ORF494P (98% identity) | M.Ngo34769ORF3345P | |
| 3355 | tRNA pseudouridine(55) synthase TruB | |||