Neisseria gonorrhoeae 34530 |
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Putative Neisseria gonorrhoeae 34530 RM systems
Ref: Bharat,A. unpublished
REBASE ref # 22735
Complete sequence: 2,228,373 bp
GenBank #: CP016016
REBASE acronym: Ngo34530
Org_num: 19885
All begin A9Y60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2680 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2685 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo34530ORF2685P | |
| 2690 | DNA damage-inducible protein D | |||
| 2695 | S | S.NgoJH9ORFNP (100% identity) | S1.Ngo34530ORF2685P | |
| ??? | S | S2.NgoWOORF429P (100% identity) | S2.Ngo34530ORF2685P | |
| 2705 | R | NgoNCORF566P (100% identity) | Ngo34530ORF2685P | |
| 2710 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5530 | ABC transporter | |||
| 5535 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo34530ORF5535P |
| 5540 | 279 aa hypothetical protein | |||
| 5545 | 186 aa hypothetical protein | |||
| 5550 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo34530ORF5535P |
| 5555 | 77 aa hypothetical protein | |||
| ??? | R | NgoWPIP (100% identity) | GAGNNNNNTAC | Ngo34530ORF5535P |
| 5565 | recombination factor protein RarA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | leucine--tRNA ligase | |||
| 40 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo34530ORF40P |
| 45 | DNA methyltransferase | |||
| 40 | restriction endonuclease | |||
| 45 | M | M.NgoWPORF8P (100% identity) | GATC | M.Ngo34530ORF45P |
| 50 | 0 aa hypothetical protein | |||
| 1150 | 48 aa hypothetical protein | |||
| ??? | M | M.NgoWSORF1801P (100% identity) | CCGG | M.Ngo34530ORF1155P |
| 1165 | R | NgoWSORF1801P (98% identity) | CCGG | Ngo34530ORF1155P |
| 1170 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo34530ORF1155P | |
| 1175 | replication initiation factor | |||
| 1515 | transposase | |||
| 1520 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo34530ORF1520P |
| ??? | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo34530ORF1520P |
| 1530 | excinuclease ABC subunit A | |||
| 2140 | phenylalanine--tRNA ligase subunit alpha | |||
| 2145 | V | V.NgoWSORF391P (100% identity) | V.Ngo34530ORF2150P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo34530ORF2150P | |
| 2160 | R | NgoWSORF391P (100% identity) | Ngo34530ORF2150P | |
| 2165 | phenylalanine--tRNA ligase subunit beta | |||
| 2430 | 215 aa hypothetical protein | |||
| 2435 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo34530ORF2435P |
| 2440 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo34530ORF2435P |
| 2445 | 140 aa hypothetical protein | |||
| 2465 | uroporphyrinogen decarboxylase | |||
| 2470 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo34530ORF2480P | |
| 2475 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo34530ORF2480P |
| 2480 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo34530ORF2480P |
| 2485 | 0 aa hypothetical protein | |||
| 4350 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 4355 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo34530ORF4360P |
| 4360 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo34530ORF4360P |
| 4365 | anthranilate synthase component I | |||
| 5665 | 3-isopropylmalate dehydratase small subunit | |||
| 5670 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo34530ORF5670P |
| 5675 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo34530ORF5670P |
| 5680 | 3-isopropylmalate dehydrogenase | |||
| 10050 | cysteine--tRNA ligase | |||
| 10055 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo34530ORF10060P |
| 10060 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo34530ORF10060P |
| 10065 | GTPase ObgE | |||
| 10595 | RNA-binding transcriptional accessory protein | |||
| 10600 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo34530ORF10600P |
| 10605 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo34530ORF10600P |
| 10610 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo34530ORF10600P |
| 10615 | 93 aa hypothetical protein | |||
| 11220 | ribosome recycling factor | |||
| 11225 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo34530ORF11225P |
| 11230 | R | type II restriction endonuclease | GGCC | Ngo34530ORF11225P |
| 11235 | 375 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5850 | tRNA pseudouridine(55) synthase TruB | |||
| 5855 | M | M.Ngo9112ORF5535P (100% identity) | GCAGA | M.Ngo34530ORF5855P |
| 5860 | R | NgoNCORF1272P (100% identity) | GCAGA | Ngo34530ORF5855P |
| 5865 | alpha-hydroxy-acid oxidizing enzyme | |||
| 6345 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 6350 | R | NgoWPIIP (100% identity) | CCACC | Ngo34530ORF6355P |
| 6355 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo34530ORF6355P |
| 6360 | peptidylprolyl isomerase | |||