Ref: Bharat,A. unpublished

REBASE ref # 22735

Complete sequence: 2,228,373 bp

GenBank #: CP016016

REBASE acronym: Ngo34530

Org_num: 19885

 

All begin A9Y60_

Type I
ORF Gene Most similar Specificity Name
 
2680 ADP-glyceromanno-heptose 6-epimerase
2685 M M.NgoSH240ORFMP (100% identity) M.Ngo34530ORF2685P
2690 DNA damage-inducible protein D
2695 S S.NgoJH9ORFNP (100% identity) S1.Ngo34530ORF2685P
??? S S2.NgoWOORF429P (100% identity) S2.Ngo34530ORF2685P
2705 R NgoNCORF566P (100% identity) Ngo34530ORF2685P
2710 ATP-dependent Clp protease ATP-binding subunit
 
5530 ABC transporter
5535 M M.NgoWSI (100% identity) GAGNNNNNTAC M.Ngo34530ORF5535P
5540 279 aa hypothetical protein
5545 186 aa hypothetical protein
5550 S S.NgoWSI (100% identity) GAGNNNNNTAC S.Ngo34530ORF5535P
5555 77 aa hypothetical protein
??? R NgoWPIP (100% identity) GAGNNNNNTAC Ngo34530ORF5535P
5565 recombination factor protein RarA
Type II
ORF Gene Most similar Specificity Name
 
35 leucine--tRNA ligase
40 R restriction endonuclease GATC Ngo34530ORF40P
45 DNA methyltransferase
 
40 restriction endonuclease
45 M M.NgoWPORF8P (100% identity) GATC M.Ngo34530ORF45P
50 0 aa hypothetical protein
 
1150 48 aa hypothetical protein
??? M restriction endonuclease subunit M CCGG M.Ngo34530ORF1155P
1165 R TIGR02391 family protein CCGG Ngo34530ORF1155P
1170 V very short patch repair endonuclease V.Ngo34530ORF1155P
1175 replication initiation factor
 
1515 transposase
1520 M DNA (cytosine-5-)-methyltransferase CCGCGG M.Ngo34530ORF1520P
??? R NgoMIIIM CCGCGG Ngo34530ORF1520P
1530 excinuclease ABC subunit A
 
2140 phenylalanine--tRNA ligase subunit alpha
2145 V very short patch repair endonuclease V.Ngo34530ORF2150P
??? M M.NgoWSORF391P (100% identity) M.Ngo34530ORF2150P
2160 R restriction endonuclease Ngo34530ORF2150P
2165 phenylalanine--tRNA ligase subunit beta
 
2430 215 aa hypothetical protein
2435 RM 274 aa hypothetical protein GACNNNNNTGA Ngo34530ORF2435P
2440 S methyltransferase GACNNNNNTGA S.Ngo34530ORF2435P
2445 140 aa hypothetical protein
 
2465 uroporphyrinogen decarboxylase
2470 H H.NgoWSORF459P (100% identity) H.Ngo34530ORF2480P
2475 R NgoWSORF459P (100% identity) GCSGC Ngo34530ORF2480P
2480 M DNA (cytosine-5-)-methyltransferase GCSGC M.Ngo34530ORF2480P
2485 0 aa hypothetical protein
 
4350 5-(carboxyamino)imidazole ribonucleotide
4355 R NgoWSORF1056P (100% identity) GCCGGC Ngo34530ORF4360P
4360 M DNA (cytosine-5-)-methyltransferase GCCGGC M.Ngo34530ORF4360P
4365 anthranilate synthase component I
 
5665 3-isopropylmalate dehydratase small subunit
5670 M DNA (cytosine-5-)-methyltransferase GGNNCC M.Ngo34530ORF5670P
5675 R NgoWSORF784P (100% identity) GGNNCC Ngo34530ORF5670P
5680 3-isopropylmalate dehydrogenase
 
10050 cysteine--tRNA ligase
10055 R restriction endonuclease RGCGCY Ngo34530ORF10060P
10060 M DNA (cytosine-5-)-methyltransferase RGCGCY M.Ngo34530ORF10060P
10065 GTPase ObgE
 
10595 RNA-binding transcriptional accessory protein
10600 M DNA (cytosine-5-)-methyltransferase GGTGA M1.Ngo34530ORF10600P
10605 M modification methylase HphIB GGTGA M2.Ngo34530ORF10600P
10610 R restriction endonuclease GGTGA Ngo34530ORF10600P
10615 93 aa hypothetical protein
 
11220 ribosome recycling factor
11225 M DNA (cytosine-5-)-methyltransferase GGCC M.Ngo34530ORF11225P
11230 R type II restriction endonuclease GGCC Ngo34530ORF11225P
11235 375 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
5850 tRNA pseudouridine(55) synthase TruB
5855 M M.NgoWFORF680P (99% identity) GCAGA M.Ngo34530ORF5855P
5860 R NgoNCORF1272P (100% identity) GCAGA Ngo34530ORF5855P
5865 alpha-hydroxy-acid oxidizing enzyme
 
6345 tRNA 2-thiocytidine(32) synthetase TtcA
6350 R NgoWPIIP (100% identity) CCACC Ngo34530ORF6355P
6355 M type III restriction endonuclease subunit M CCACC M.Ngo34530ORF6355P
6360 peptidylprolyl isomerase