Vibrio vulnificus FORC_016 |
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Putative Vibrio vulnificus FORC_016 RM systems
Ref: Lee,J.-H. et al. unpublished
REBASE ref # 21488
| Sequence length: | GenBank #: | |
| chromosome I: | 3,234,424 bp | CP011775 |
| chromosome II: | 1,837,945 bp | CP011776 |
REBASE acronym: Vvu16
Org_num: 19638
All begin FORC16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 337 | 332 aa hypothetical protein | |||
| 338 | S | S.Vvu009ORF2459P (100% identity) | S.Vvu16ORF339P | |
| 339 | M | M.Vvu009ORF2459P (100% identity) | M.Vvu16ORF339P | |
| 340 | Multidrug and toxin extrusion (MATE) family | |||
| 341 | 428 aa hypothetical protein | |||
| 342 | R | Vvu009ORF2459P (100% identity) | Vvu16ORF339P | |
| 343 | 385 aa hypothetical protein | |||
| 472 | 187 aa hypothetical protein | |||
| 473 | M | M.Vvu009ORF2327P (100% identity) | M.Vvu16ORF473P | |
| 474 | S | S.Vvu009ORF2327P (100% identity) | S.Vvu16ORF473P | |
| 475 | R | Vvu009ORF2327P (100% identity) | Vvu16ORF473P | |
| 476 | ATP-dependent endonuclease, OLD family | |||
| 1248 | Tricarboxylate transport protein TctC | |||
| 1249 | R | Vvu009ORF1549P (100% identity) | Vvu16ORF1250P | |
| 1250 | M | M.Vvu009ORF1549P (100% identity) | M.Vvu16ORF1250P | |
| 1251 | S | S.Vvu009ORF1549P (100% identity) | S.Vvu16ORF1250P | |
| 1252 | 86 aa hypothetical protein | |||
| 1860 | RNA polymerase associated protein RapA | |||
| 1861 | R | Vvu009ORF927P (100% identity) | Vvu16ORF1865P | |
| 1862 | 663 aa hypothetical protein | |||
| 1863 | 470 aa hypothetical protein | |||
| 1864 | S | S.Vvu009ORF927P (100% identity) | S.Vvu16ORF1865P | |
| 1865 | M | M.Vvu009ORF927P (100% identity) | M.Vvu16ORF1865P | |
| 1866 | 687 aa hypothetical protein | |||
| chromosome II | ||||
| 3552 | 263 aa hypothetical protein | |||
| 3553 | M | M.Vvu009ORF3560P (100% identity) | M.Vvu16ORF3553P | |
| 3554 | S | S.Vvu009ORF3560P (100% identity) | S.Vvu16ORF3553P | |
| 3555 | 344 aa hypothetical protein | |||
| 3556 | R | Vvu009ORF3560P (100% identity) | Vvu16ORF3553P | |
| 3557 | 145 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2561 | Ribulose-phosphate 3-epimerase | |||
| 2562 | M | M.VvuGCU01DamP (100% identity) | GATC | M.Vvu16DamP |
| 2563 | DamX, an inner membrane protein involved in bile | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 344 | 54 aa hypothetical protein | |||
| 345 | R | VpaIsc4AMrrP (100% identity) | Vvu16MrrP | |
| 346 | Retron-type RNA-directed DNA polymerase | |||