Escherichia coli O157 180-PT54 |
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Putative Escherichia coli O157 180-PT54 RM systems
Ref: Cowley,L.A. unpublished
REBASE ref # 22404
| Sequence length: | GenBank #: | |
| Chromosome: | 5,509,528 bp | CP015832 |
| plasmid unnamed: | 240,662 bp | CP015833 |
REBASE acronym: EcoPT54
Org_num: 19862
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.EcoPT54III |
| ??? | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.EcoPT54III |
| ??? | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | EcoPT54IIIP |
| ??? | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoPT54IIP |
| ??? | M | M.EcoL933ORFEP (100% identity) | CACNNNNNNNCTGG | M.EcoPT54II |
| ??? | S | S.Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | S.EcoPT54II |
| ??? | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPT54DamP |
| ??? | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoPT54ORFGP |
| ??? | M | M.EcoSTEC416ORF20240P (100% identity) | GATC | M.EcoPT54ORFFP |
| ??? | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoPT54DcmP |
| ??? | V | V.EcoL933DcmP (100% identity) | V.EcoPT54DcmP | |
| ??? | M | M.EcoTWORF1742P (100% identity) | M.EcoPT54ORFEP | |
| ??? | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoPT54I |
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.EcoPT54ORFMP | |
| plasmid unnamed | ||||
| ??? | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoPT54ORFLP |
| ??? | M | M.YpsF1ORFBP (94% identity) | M.EcoPT54ORFKP | |
| ??? | hypothetical protein | |||
| ??? | M | M.YpsF1ORFDP (95% identity) | M.EcoPT54ORFIP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | type I restriction endonuclease EcoAI subunit S | |||
| ??? | R | EcoX21GmrDP (100% identity) | EcoPT54GmrDP | |
| ??? | 293 aa hypothetical protein | |||