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Putative Pectobacterium carotovorum subsp. carotovorum PC1 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 11168
Complete sequence: 4,862,913 bp
GenBank #: CP001657 (NC_012917)
REBASE acronym: PcaPC1
Org_num: 5475
All begin PC1_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
860 | protein of unknown function DUF45 | |||
861 | R | BspIr50ORF18535P (97% identity) | PcaPC1ORF865P | |
862 | Appr-1-p processing domain protein | |||
863 | 218 aa conserved hypothetical protein | |||
864 | S | S.Kpn342ORF4976P (58% identity) | S.PcaPC1ORF865P | |
865 | M | M.LposN51ORFCP (95% identity) | M.PcaPC1ORF865P | |
866 | 79 aa conserved hypothetical protein | |||
2874 | 555 aa conserved hypothetical protein | |||
2875 | S | S.Kae1464ORF21840P (47% identity) | S.PcaPC1ORF2876P | |
2876 | M | M.SmamS71ORF2490P (90% identity) | M.PcaPC1ORF2876P | |
2877 | R | PcaZJ42ORF15125P (98% identity) | PcaPC1ORF2876P | |
2878 | phage transcriptional regulator, AlpA | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2635 | 192 aa conserved hypothetical protein | |||
2636 | M | M.Pca251ORF13960P (79% identity) | GATC | M.PcaPC1ORF2636P |
2637 | 97 aa hypothetical protein | |||
3879 | ribulose-phosphate 3-epimerase | |||
3880 | M | M.PcaPCC51ORFBP (99% identity) | GATC | M.PcaPC1DamP |
3881 | Sporulation domain protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
847 | integrase family protein | |||
848 | M | M.Pbr1719ORF11200P (99% identity) | M.PcaPC1ORF848P | |
849 | R | Pbr1719ORF11200P (99% identity) | PcaPC1ORF848P | |
850 | type III restriction protein res subunit | |||
849 | Type III site-specific deoxyribonuclease | |||
850 | R | Dsp1600ORFFP (98% identity) | PcaPC1ORF851P | |
851 | M | M.Dch1ORF18975P (98% identity) | M.PcaPC1ORF851P | |
852 | 49 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2310 | 270 aa hypothetical protein | |||
2311 | R | YenY4I (37% identity) | PcaPC1McrBP | |
2312 | pseudogene |