Methanoculleus sediminis S3Fa |
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Putative Methanoculleus sediminis S3Fa RM systems
Ref: Chen,S.C. et al. Int. J. Syst. Evol. Microbiol. (2015) In press
REBASE ref # 21995
Contig set: 2,488,374 bp
GenBank #: JXOJ00000000 (NZ_JXOJ00000000)
REBASE acronym: MseS3Fa
Org_num: 19340
All begin SZ63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 645 | glutamine synthetase | |||
| 650 | R | MboBA1ORF1196P (85% identity) | MseS3FaORF680P | |
| 655 | S | S.Dac2973ORF1014P (49% identity) | S.MseS3FaORF680P | |
| 660 | 68 aa hypothetical protein | |||
| 665 | 61 aa hypothetical protein | |||
| 670 | 352 aa hypothetical protein | |||
| 675 | 117 aa hypothetical protein | |||
| 680 | M | M.MboBA1ORF1196P (88% identity) | M.MseS3FaORF680P | |
| 685 | 105 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8810 | 89 aa hypothetical protein | |||
| 8815 | M | M.Msu15122ORF2340P (89% identity) | GTAC | M.MseS3FaORF8815P |
| 8820 | 411 aa hypothetical protein | |||
| 11140 | cell filamentation protein Fic | |||
| ??? | R | BsaXSCORF8375P (38% identity) | CCWGG | MseS3FaORF11145P |
| ??? | HhH-GPD family protein | |||
| 11145 | M | M.Gsp3708ORF769P (59% identity) | CCWGG | M.MseS3FaORF11145P |
| 11150 | 96 aa hypothetical protein | |||
| 11760 | CRISPR-associated protein Cas1 | |||
| 11765 | R | IabMSPCTORF12020P (39% identity) | YGGCCR | MseS3FaORF11770P |
| 11770 | M | M.BbrDZQ7ORF26565P (66% identity) | YGGCCR | M.MseS3FaORF11770P |
| ??? | V | V.Llo4968ORF1121P (46% identity) | V.MseS3FaORF11770P | |
| 11780 | cupin | |||
| 1610 | transposase | |||
| 1615 | M | M.Msu15122ORF9300P (94% identity) | GATC | M.MseS3FaORF1615P |
| 1620 | DNA methylase | |||
| 1615 | modification methylase | |||
| 1620 | M | M.Msu15122ORF9305P (92% identity) | M.MseS3FaORF1620P | |
| 1625 | 260 aa hypothetical protein | |||
| 4950 | 176 aa hypothetical protein | |||
| 4955 | R | restriction endonuclease DdeI | CTNAG | MseS3FaORF4960P |
| 4960 | M | M.UbaMDORFP10P (57% identity) | CTNAG | M.MseS3FaORF4960P |
| 4970 | DNA polymerase II large subunit | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1250 | 113 aa hypothetical protein | |||
| 1255 | R | Msu15122ORF8945P (92% identity) | MseS3FaORF1255P | |
| 1260 | acetyltransferase | |||