Ralstonia pickettii 12D |
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Putative Ralstonia pickettii 12D RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 11153
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,647,724 bp | CP001644 (NC_012856) |
| plasmid pRp12D01: | 389,779 bp | CP001646 (NC_012855) |
REBASE acronym: RpiD
Org_num: 5350
All begin Rpic12D_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 205 | 476 aa conserved hypothetical protein | |||
| 206 | M | M.Rpi8657ORF12425P (99% identity) | M.RpiDORF206P | |
| 207 | UvrD/REP helicase | |||
| 208 | V | DNA mismatch endonuclease Vsr | V.RpiDORF206P | |
| 209 | 315 aa conserved hypothetical protein | |||
| 1811 | tryptophan synthase, alpha subunit | |||
| 1812 | M | M.Rpi8657ORF20975P (100% identity) | M.RpiDORF1812P | |
| 1813 | tryptophan synthase, beta subunit | |||
| 2669 | transposase IS66 | |||
| 2670 | RM | Rpi8657ORF7315P (100% identity) | RpiDORF2670P | |
| 2671 | helicase domain protein | |||
| plasmid pRp12D01 | ||||
| 4876 | 674 aa hypothetical protein | |||
| 4877 | M | M.RspOR214ORF2307P (100% identity) | CTCGAG | M.RpiDORF4877P |
| 4878 | 168 aa hypothetical protein | |||
| 4983 | 229 aa hypothetical protein | |||
| 4984 | M | M.RspOR214ORF1990P (100% identity) | M.RpiDORF4984P | |
| 4985 | diguanylate cyclase/phosphodiesterase with MHYT | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 208 | DNA mismatch endonuclease Vsr | |||
| 209 | R | Rso244McrBP (98% identity) | RpiDMcrBP | |
| 210 | 606 aa conserved hypothetical protein | |||