Pseudomonas fluorescens Ps006 |
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Putative Pseudomonas fluorescens Ps006 RM systems
Ref: Gamez,R.M. et al. Genome Announc 4 (3) (2016)
REBASE ref # 21972
Contig set: 6,250,362 bp
GenBank #: LRMR00000000 (NZ_LRMR00000000)
REBASE acronym: PflPS006
Org_num: 19418
All begin AWV77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 340 | pseudogene | |||
| 345 | R | Pfl3636ORF11905P (99% identity) | PflPS006ORF355P | |
| 350 | transcriptional regulator | |||
| 355 | M | M.PspM007ORF3515P (99% identity) | M.PflPS006ORF355P | |
| 360 | S | S.Pst17588ORF286P (57% identity) | S.PflPS006ORF355P | |
| 365 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16155 | DNA-binding protein | |||
| 16160 | M | M.PstKGS2ORFAP (93% identity) | CCGCGG | M.PflPS006ORF16160P |
| 16165 | R | PflN2E2ORFAP (85% identity) | CCGCGG | PflPS006ORF16160P |
| 16170 | phosphotransferase | |||
| 20010 | 226 aa hypothetical protein | |||
| 20015 | M | restriction endonuclease subunit M | M.PflPS006ORF20015P | |
| 20020 | single-stranded DNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 360 | type I restriction endonuclease subunit S | |||
| 365 | R | PspM007MrrP (95% identity) | PflPS006MrrP | |
| 370 | LysR family transcriptional regulator | |||