Riemerella anatipestifer RCAD0122 |
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Putative Riemerella anatipestifer RCAD0122 RM systems
Ref: Song,X.H. et al. Genome Announc 4 (3) (2016)
REBASE ref # 21970
| Sequence length: | GenBank #: | |
| Chromosome: | 2,198,654 bp | LUDU00000000 (NZ_LUDU00000000) |
| Chromosome: | 2,220,138 bp | CP088073 |
REBASE acronym: Ran122
Org_num: 19527
All begin AWB56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9380 | endonuclease | |||
| 9385 | R | RanE14ORF8980P (100% identity) | RTANNNNNNRTCG | Ran122ORF9395P |
| 9390 | S | S.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | S.Ran122ORF9395P |
| 9395 | M | M.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | M.Ran122ORF9395P |
| Chromosome | ||||
| 9120 | IS982-like element ISRa1 family transposase | |||
| 9125 | M | M.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | M.Ran122ORF9395P |
| 9130 | S | S.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | S.Ran122ORF9395P |
| 9135 | R | RanE14ORF8980P (100% identity) | RTANNNNNNRTCG | Ran122ORF9395P |
| 9140 | endonuclease/exonuclease/phosphatase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10280 | M | M1.RanYb2ORF9770P (100% identity) | GATC | M1.Ran122ORF10280P |
| 10285 | R | RanYb2ORF9770P (100% identity) | GATC | Ran122ORF10280P |
| 10290 | M | M2.RanYb2ORF9770P (100% identity) | GATC | M2.Ran122ORF10280P |
| 10295 | 276 aa hypothetical protein | |||
| 9085 | 239 aa hypothetical protein | |||
| 9090 | R | RanYb2ORF9550P (100% identity) | GGATG | Ran122ORF9095P |
| 9095 | M | M2.RanYb2ORF9550P (100% identity) | GGATG | M1.Ran122ORF9095P |
| 9100 | M | M1.RanYb2ORF9550P (100% identity) | GGATG | M2.Ran122ORF9095P |
| 9105 | 187 aa hypothetical protein | |||
| 3555 | ATPase | |||
| 3560 | M | M.RanYb2ORF4780P (100% identity) | GAATTC | M.Ran122ORF3560P |
| 3565 | R | RanYb2ORF4780P (100% identity) | GAATTC | Ran122ORF3560P |
| 3570 | 162 aa hypothetical protein | |||
| 4135 | 136 aa hypothetical protein | |||
| 4140 | M | M.RanCORF85P (99% identity) | M.Ran122ORF4140P | |
| 4145 | 504 aa hypothetical protein | |||
| 4925 | 213 aa hypothetical protein | |||
| 4930 | RM | RanYb2ORF5990P (100% identity) | GAAAGAG | Ran122ORF4930P |
| 4935 | 128 aa hypothetical protein | |||
| Chromosome | ||||
| 2810 | universal stress protein | |||
| 2815 | M | M.RanYMDndCP (100% identity) | GAAC | M.Ran122DndCP |
| 2820 | DNA sulfur modification protein DndD | |||
| 2815 | DNA phosphorothioation system sulfurtransferase | |||
| 2820 | M | M.RanYMDndDP (100% identity) | GAAC | M.Ran122DndDP |
| 2825 | DndE family protein | |||
| 2820 | DNA sulfur modification protein DndD | |||
| 2825 | M | M.RanYMDndEP (100% identity) | GAAC | M.Ran122DndEP |
| 2830 | HmuY family protein | |||
| 6350 | 128 aa hypothetical protein | |||
| 6355 | RM | RanYb2ORF5990P (100% identity) | GAAAGAG | Ran122ORF4930P |
| 6360 | 213 aa hypothetical protein | |||
| 7140 | 504 aa hypothetical protein | |||
| 7145 | M | M.RanCORF85P (99% identity) | M.Ran122ORF4140P | |
| 7150 | DUF1320 family protein | |||
| 7725 | 162 aa hypothetical protein | |||
| 7730 | R | RanYb2ORF4780P (100% identity) | GAATTC | Ran122ORF3560P |
| 7735 | M | M.RanYb2ORF4780P (100% identity) | GAATTC | M.Ran122ORF3560P |
| 7740 | ATPase | |||
| 9410 | 173 aa hypothetical protein | |||
| 9415 | M | M1.RanYb2ORF9550P (100% identity) | GGATG | M2.Ran122ORF9095P |
| 9420 | M | M2.RanYb2ORF9550P (100% identity) | GGATG | M1.Ran122ORF9095P |
| 9425 | R | RanYb2ORF9550P (100% identity) | GGATG | Ran122ORF9095P |
| 9430 | DUF4469 domain-containing protein | |||
| 9675 | DNA adenine methylase | |||
| 9680 | R | RanYb2ORF9770P (100% identity) | GATC | Ran122ORF10280P |
| 9685 | M | M2.RanYb2ORF9770P (100% identity) | GATC | M2.Ran122ORF10280P |
| 9690 | GLPGLI family protein | |||