Lactobacillus casei N87 |
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Putative Lactobacillus casei N87 RM systems
Ref: Zotta,T. et al. Genome Announc 4 (3) (2016)
REBASE ref # 21966
Contig set: 3,001,027 bp
GenBank #: LCUN00000000 (NZ_LCUN00000000)
REBASE acronym: LcaN87
Org_num: 19350
All begin AAW28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6605 | pseudogene | |||
| 6610 | R | LchFBL7ORF9215P (94% identity) | LcaN87ORF6615P | |
| 6615 | M | M.LchFBL7ORF9215P (95% identity) | M.LcaN87ORF6615P | |
| 6620 | S | S1.Lst115425ORF208P (50% identity) | S1.LcaN87ORF6615P | |
| 6625 | integrase | |||
| 6630 | S | S2.Lsp15471ORF1918P (61% identity) | S2.LcaN87ORF6615P | |
| 6635 | 694 aa hypothetical protein | |||
| 2420 | 456 aa hypothetical protein | |||
| 2425 | M | 461 aa hypothetical protein | M.LcaN87ORF2425P | |
| 2430 | 181 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | 111 aa hypothetical protein | |||
| 1820 | R | LpaFX6ORF10595P (77% identity) | LcaN87ORF1825P | |
| 1825 | M | M.LpaFX6ORF10595P (83% identity) | GTCGAC | M.LcaN87ORF1825P |
| 1830 | GMP synthase | |||
| 2350 | RpiR family transcriptional regulator | |||
| 2355 | M | M.Lpe9D3ORF15735P (67% identity) | GATATC | M.LcaN87ORF2355P |
| 2360 | R | LrhPenORF5780P (53% identity) | GATATC | LcaN87ORF2355P |
| 2365 | transposase | |||