Klebsiella pneumoniae subsp. pneumoniae KP48 |
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Putative Klebsiella pneumoniae subsp. pneumoniae KP48 RM systems
Ref: Villa,L. et al. Genome Announc 4 (2) (2016)
REBASE ref # 21912
Contig set: 5,679,902 bp
GenBank #: LKAB00000000 (NZ_LKAB00000000)
REBASE acronym: KpnKP48
Org_num: 19355
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26 | transposase | |||
| 28 | R | Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | KpnKP48ORFGP |
| 33 | S | S.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | S.KpnKP48ORFGP |
| 35 | M | M.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | M.KpnKP48ORFGP |
| 37 | 76 aa hypothetical protein | |||
| 84 | 167 aa hypothetical protein A13Y_00251 | |||
| 86 | R | KpnsST307aORF23170P (100% identity) | KpnKP48ORFCP | |
| 89 | S | S.KpnsST307aORF23170P (100% identity) | S.KpnKP48ORFCP | |
| 90 | M | M2.KpnPT04ORF23310P (100% identity) | M2.KpnKP48ORFCP | |
| 92 | M | M1.KpnstKP6ORF18380P (100% identity) | M1.KpnKP48ORFCP | |
| 93 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17 | transposase | |||
| 18 | R | YpsR1ORFAP (100% identity) | CCWGG | KpnKP48ORFHP |
| 20 | M | M.UbapDS2ORFAP (100% identity) | CCWGG | M.KpnKP48ORFHP |
| 21 | 62 aa hypothetical protein | |||
| 68 | 102 aa hypothetical protein | |||
| 70 | M | M.Kqu56ORFAP (100% identity) | M.KpnKP48ORFFP | |
| 73 | 436 aa hypothetical protein | |||
| 102 | 103 aa hypothetical protein | |||
| 103 | M | M.Kpn80225ORFCP (99% identity) | M.KpnKP48ORFEP | |
| 106 | Uncharacterised protein | |||
| 956 | crossover junction endodeoxyribonuclease | |||
| 958 | M | M.KpnstKP6ORF2850P (100% identity) | GATC | M.KpnKP48ORFBP |
| 960 | replication protein | |||
| 2409 | drug/metabolite exporter YedA | |||
| ??? | V | V.Ksp2N3ORFEP (75% identity) | V.KpnKP48ORFAP | |
| 2414 | M | M.KpnTAKPN1DcmP (99% identity) | CCWGG | M.KpnKP48ORFAP |
| 2421 | 74 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 233 | cell division protein DamX | |||
| 236 | M | M.KpnstKP6DamP (100% identity) | GATC | M.KpnKP48ORFDP |
| 238 | ribulose-phosphate 3-epimerase | |||