Campylobacter iguaniorum RM11343 |
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Putative Campylobacter iguaniorum RM11343 RM systems
Ref: Miller,W.G. et al. unpublished
REBASE ref # 22273
Complete sequence: 1,544,095 bp
GenBank #: CP015577
REBASE acronym: Cig11343
Org_num: 19689
All begin CIG11343_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8 | 235 aa hypothetical protein | |||
| 9 | M | M.HmuST1ORF5365P (41% identity) | M.Cig11343ORF9P | |
| 10 | R | HmuST1ORF5370P (67% identity) | Cig11343ORF9P | |
| 11 | pseudogene | |||
| 100 | superoxide dismutase (Cu/Zn) | |||
| ??? | S | S.Cav24591ORF33P (18% identity) | S1.Cig11343ORF101P | |
| ??? | S | HhiYS1ORFFP (10% identity) | S2.Cig11343ORF101P | |
| 103 | RM | CpeNE18ORF12755P (59% identity) | Cig11343ORF101P | |
| 104 | 95 aa hypothetical protein | |||
| 263 | branched-chain amino-acid aminotransferase | |||
| 264 | R | Csp1485ORF318P (99% identity) | GCNGC | Cig11343ORF265P |
| 265 | M | M.Csp1485ORF318P (99% identity) | GCNGC | M.Cig11343ORF265P |
| 266 | 4-oxalocrotonate tautomerase family enzyme | |||
| 283 | transcription elongation factor GreA | |||
| 284 | M | M.Cmu43264ORF179P (66% identity) | GGCC | M.Cig11343ORF284P |
| 285 | R | Dpn677ORF3925P (58% identity) | GGCC | Cig11343ORF284P |
| 286 | N-acetyl-gamma-glutamylphosphate reductase | |||
| 308 | 78 aa hypothetical protein | |||
| 309 | M | M1.HpyIS5ORF1070P (76% identity) | M.Cig11343ORF309P | |
| 310 | 247 aa hypothetical protein | |||
| 311 | McrBC 5-methylcytosine restriction system, | |||
| 312 | R | R2.HpyK117ORF945P (60% identity) | Cig11343ORF309P | |
| 313 | pseudogene | |||
| 570 | two-component sensor histidine kinase | |||
| 571 | R | Nsu20199ORFCP (57% identity) | Cig11343ORF572P | |
| 572 | M | M.Pdi11157ORF792P (47% identity) | GAATTC | M.Cig11343ORF572P |
| 573 | formate dehydrogenase biogenesis protein FdhT | |||
| 873 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | |||
| 874 | RM | Cig2463DORF899P (54% identity) | Cig11343ORF874P | |
| 875 | nicotinate phosphoribosyltransferase, subgroup A | |||
| 981 | valyl-tRNA synthetase | |||
| 982 | M | M.Csp11764ORF508P (71% identity) | GTAC | M.Cig11343ORF982P |
| 983 | R | Csp11764ORF508P (60% identity) | GTAC | Cig11343ORF982P |
| 984 | DL-methionine ABC transporter MetINQ, | |||
| 1011 | 127 aa hypothetical protein | |||
| 1012 | M | M.Csp1485ORF1048P (99% identity) | GAATTC | M.Cig11343ORF1012P |
| 1013 | glycyl-tRNA synthetase, beta chain | |||
| 1059 | glycerol 3-phosphate dehydrogenase | |||
| 1060 | R | Csp7795ORF988P (50% identity) | GANTC | Cig11343ORF1060P |
| 1061 | 243 aa hypothetical protein | |||
| 1569 | dihydroxyacid dehydratase | |||
| ??? | M | cytosine-specific methyltransferase | GGNCC | M.Cig11343ORF1570P |
| 1571 | 664 aa hypothetical protein | |||
| ??? | cytosine-specific methyltransferase | |||
| 1571 | R | Cfe4531ORF4430P (62% identity) | GCATC | Cig11343ORF1573P |
| 1572 | adenine-specific DNA methyltransferase | |||
| 1573 | M | M2.Cig2463DORF207P (69% identity) | GCATC | M.Cig11343ORF1573P |
| 1574 | 52 aa hypothetical protein | |||
| 1571 | 664 aa hypothetical protein | |||
| 1572 | M | M1.Hci629ORFNP (73% identity) | GCATC | M.Cig11343ORF1572P |
| 1573 | adenine-specific DNA methyltransferase | |||
| 1617 | 85 aa hypothetical protein | |||
| 1618 | M | M.Cup197059ORF1480P (61% identity) | GCGC | M.Cig11343ORF1618P |
| 1619 | R | Csp1485ORF1626P (55% identity) | GCGC | Cig11343ORF1618P |
| 1620 | 139 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12 | 87 aa hypothetical protein | |||
| 13 | R | Csp427ORF957P (47% identity) | Cig11343ORF14P | |
| 14 | M | type III restriction/modification system, mod | M.Cig11343ORF14P | |
| 15 | flagellar hook protein | |||
| 143 | phosphate ABC transporter permease subunit PstC | |||
| 144 | R | 237 aa hypothetical protein | Cig11343ORF145P | |
| 145 | M | type III restriction/modification system, mod | M.Cig11343ORF145P | |
| 146 | nucleotidyl transferase domain protein | |||
| 1041 | molybdopterin-guanine dinucleotide biosynthesis protein B | |||
| 1042 | M | M.ChyCHY5ORF1096P (75% identity) | M.Cig11343ORF1042P | |
| 1043 | R | Cfe4531ORF1660P (75% identity) | Cig11343ORF1042P | |
| 1044 | lipid II flippase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 310 | 247 aa hypothetical protein | |||
| 311 | R | R1.HpyH018ORF860P (74% identity) | Cig11343McrBP | |
| 312 | type II restriction endonuclease, LlaJI family | |||