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Putative Ardenticatena species Cfx-K RM systems
Ref: McIlroy,J.Simon. and Karst M,S.?ren. unpublished
REBASE ref # 22110
Sequence length: | GenBank #: | |
chromosome I: | 3,989,163 bp | LN890655 |
chromosome II: | 1,004,044 bp | LN890656 |
REBASE acronym: AspCfxK
Org_num: 19539
All begin CFX0092_A, CFX0092_B
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
1 | 3-hydroxy-3-methylglutaryl-coenzyme A | |||
2 | M | M.Mha6AcORF1859P (63% identity) | M.AspCfxKORF2P | |
3 | conserved protein of unknown function | |||
4 | S | S.XtrKm7ORF7965P (30% identity) | S.AspCfxKORF2P | |
5 | R | CspAM553ORF8805P (52% identity) | AspCfxKORF2P | |
6 | conserved protein of unknown function | |||
chromosome II | ||||
848 | conserved protein of unknown function | |||
849 | S | S.DmcATV1ORF630P (21% identity) | S.AspCfxKORF850P | |
850 | M | M.MoxORF1976P (60% identity) | M.AspCfxKORF850P | |
851 | R | MoxORF1976P (50% identity) | AspCfxKORF850P | |
852 | conserved protein of unknown function | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
594 | protein of unknown function | |||
595 | M | M.DbaSRB1ORF2817P (40% identity) | AGGCCT | M.AspCfxKORF595P |
596 | conserved protein of unknown function | |||
1725 | conserved protein of unknown function | |||
1726 | M | M.Cae14535ORF12650P (48% identity) | GATC | M.AspCfxKORF1726P |
1727 | cell wall structural complex MreBCD, actin-like | |||
1978 | Phosphoglycerate kinase | |||
1979 | M | M.Asp90ORF12329P (66% identity) | AGTACT | M.AspCfxKORF1979P |
1980 | R | Mae905ORF19040P (54% identity) | AGTACT | AspCfxKORF1979P |
1982 | C | C.Ssp6714IIP (60% identity) | C.AspCfxKORF1979P | |
1984 | Acetyltransferase | |||
2052 | prephenate dehydratase | |||
2053 | M | M.Lsp6406V (57% identity) | TTTAAA | M.AspCfxKORF2035P |
2054 | protein of unknown function | |||
2385 | protein of unknown function | |||
2386 | M | conserved protein of unknown function | TGGCCA | M.AspCfxKORF2372P |
2387 | protein of unknown function | |||
2646 | protein of unknown function | |||
2647 | R | DspNSZ14ORF526P (74% identity) | AspCfxKORF2648P | |
2648 | M | M.DlyBLORF1157P (62% identity) | M.AspCfxKORF2648P | |
2649 | protein of unknown function | |||
chromosome II | ||||
32 | conserved protein of unknown function | |||
33 | RM | Tte798ORF1765P (47% identity) | AspCfxKORF33P | |
34 | protein of unknown function | |||
101 | CRP/FNR family transcriptional regulator | |||
102 | RM | AspCfxKORF139P (74% identity) | AspCfxKORF102P | |
103 | ABC transport system permease protein | |||
113 | Helicase A859L (fragment) | |||
114 | M | M.Hru19751ORF2871P (53% identity) | CCWGG | M.AspCfxKORF113P |
115 | protein of unknown function | |||
116 | V | V.PmeCORF12940P (60% identity) | V.AspCfxKORF113P | |
117 | R | Lpl1002ORF860P (38% identity) | CCWGG | AspCfxKORF113P |
118 | Type III restriction system methylase | |||
138 | ABC transporter | |||
139 | RM | AspCfxKORF102P (74% identity) | AspCfxKORF139P | |
140 | YcfA family protein (fragment) | |||
270 | Xylose transport system permease protein XylH | |||
271 | RM | Cba153FORF15360P (40% identity) | AspCfxKORF271P | |
272 | metal cation transporter | |||
554 | TPR repeat-containing protein | |||
555 | M | M.MbaRIFORF3400P (64% identity) | CAGCTG | M.AspCfxKORF555P |
556 | R | M.Cbr22ORF48130P (20% identity) | CAGCTG | AspCfxKORF555P |
557 | Catechol-2,3-dioxygenase | |||
614 | membrane protein of unknown function | |||
615 | R | CspsAORF12515P (59% identity) | GATATC | AspCfxKORF616P |
616 | M | M.UbaMSORFF9P (51% identity) | GATATC | M.AspCfxKORF616P |
617 | Aminotransferase class I and II | |||
829 | conserved protein of unknown function | |||
830 | M | M.Kra44963ORF85P (59% identity) | TCTAGA | M.AspCfxKORF830P |
831 | Acetyltransferase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome II | ||||
739 | protein of unknown function | |||
740 | M | M.Gfu49117ORF16410P (24% identity) | M.AspCfxKORF740P | |
741 | R | EsaSS1335ORFAP (18% identity) | AspCfxKORF740P | |
742 | ABC transporter, fused permease and ATPase |