Megasphaera species DJF_B143 |
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Putative Megasphaera species DJF_B143 RM systems
Ref: Li,X. et al. Genome Announc 4 (1) (2016)
REBASE ref # 21643
Contig set: 2,581,251 bp
GenBank #: LODR00000000 (NZ_LODR00000000)
REBASE acronym: MspB143
Org_num: 19144
All begin AT798_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 30 | 115 aa hypothetical protein | |||
| 35 | S | S.Csp502ORF3525P (37% identity) | S.MspB143ORF40P | |
| 40 | M | M.Mhy10571I (67% identity) | M.MspB143ORF40P | |
| 45 | R | PmeBin112ORFCP (55% identity) | MspB143ORF40P | |
| 50 | 128 aa hypothetical protein | |||
| 1080 | restriction endonuclease | |||
| 1085 | R | Isp26ORF5050P (73% identity) | MspB143ORF1095P | |
| 1090 | S | S.PmeBin145ORFCP (55% identity) | S.MspB143ORF1095P | |
| 1095 | M | M.PmeBin56ORFCP (80% identity) | M.MspB143ORF1095P | |
| 1100 | DNA mismatch repair protein MutT | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3640 | 69 aa hypothetical protein | |||
| 3645 | M | M.Msp2341ORFAP (54% identity) | CCWGG | M.MspB143ORF3645P |
| 3650 | R | Bxy2aORF45190P (47% identity) | CCWGG | MspB143ORF3645P |
| 3655 | 934 aa hypothetical protein | |||
| 3670 | 241 aa hypothetical protein | |||
| 3675 | M | M.AspLMS39ORF5645P (48% identity) | ACCGGT | M.MspB143ORF3675P |
| 3680 | 316 aa hypothetical protein | |||
| 3685 | V | V.Mel2410ORF1935P (69% identity) | V.MspB143ORF3675P | |
| 3690 | 190 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1070 | 103 aa hypothetical protein | |||
| 1075 | R | Dsp5638McrCP (93% identity) | MspB143McrCP | |
| 1080 | R | Dsp5638ORFHP (31% identity) | MspB143McrBP | |
| 1085 | deoxyribonuclease | |||