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Putative Rickettsia africae ESF-5 RM systems
Ref: Fournier,P.E. et al. BMC Genomics 10 (1), 166 (2009)
REBASE ref # 11080
Complete sequence: 1,278,540 bp
GenBank #: CP001612 (NC_012633)
REBASE acronym: RafESF
Org_num: 5428
All begin RAF_ORF
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
789 | Methylated-DNA--protein-cysteine | |||
790 | R | Type I site-specific restriction-modification system, R subunit, partial | RafESFORFAP | |
793 | 157 aa Unknown | |||
1234 | Succinyl-diaminopimelate desuccinylase | |||
1235 | S | S.RsiSORFCP (82% identity) | S.RafESFORFBP | |
1236 | 65 aa Unknown | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
61 | ATP-dependent metalloprotease FtsH | |||
62 | M | Site-specific DNA methylase | GCGC | M.RafESFORF62P |
63 | Succinate dehydrogenase iron-sulfur protein | |||
657 | pseudogene | |||
659 | M | M.RraKORF3085P (97% identity) | GATC | M.RafESFORF659P |
660 | 568 aa Unknown | |||
710 | 103 aa Unknown | |||
711 | M | M.RpaTHORF805P (97% identity) | GATC | M.RafESFORF711P |
??? | 63 aa hypothetical protein MC1_04370 | |||
711 | Site-specific DNA methylase | |||
??? | M | 63 aa hypothetical protein MC1_04370 | GATC | M.RafESFORFCP |
712 | Transposase and inactivated derivative |