Bacteroides dorei CL03T12C01 |
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Putative Bacteroides dorei CL03T12C01 RM systems
Ref: Russell,J.T. and Davis-Richardson,A.G. unpublished
REBASE ref # 21792
Complete sequence: 5,310,365 bp
GenBank #: CP011531
REBASE acronym: Bdo12C01
Org_num: 13637
All begin ABI39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1755 | S-adenosylmethionine tRNA ribosyltransferase | |||
| 1760 | M | M.PmeBin22ORFCP (99% identity) | M.Bdo12C01ORF3417P | |
| 1765 | S | S1.Pdo2ORF20950P (79% identity) | S1.Bdo12C01ORF3417P | |
| 1770 | transposase | |||
| 1775 | 150 aa hypothetical protein | |||
| 1780 | 172 aa hypothetical protein | |||
| 1785 | 191 aa hypothetical protein | |||
| 1790 | S | 77 aa hypothetical protein | S2.Bdo12C01ORF3417P | |
| 1795 | 364 aa hypothetical protein | |||
| 1800 | R | Pdo1047IP (100% identity) | Bdo12C01ORF3417P | |
| 1805 | 343 aa hypothetical protein | |||
| 21410 | cell surface protein | |||
| 21415 | S | S2.Pdo1ORF14765P (88% identity) | S1.Bdo12C01ORF1796P | |
| 21420 | pseudogene | |||
| 21425 | S | S4.Pdo2ORF18935P (100% identity) | S2.Bdo12C01ORF1796P | |
| 21430 | S | S2.Pdo1047II (99% identity) | S3.Bdo12C01ORF1796P | |
| 21435 | 50S ribosomal protein L31 | |||
| 21440 | M | M.Pdo1047II (100% identity) | M.Bdo12C01ORF1796P | |
| 21445 | R | Bdo5136ORF1333P (99% identity) | Bdo12C01ORF1796P | |
| 21450 | C | C.Pvu201ORF22395P (100% identity) | C.Bdo12C01ORF1796P | |
| 21455 | methionine sulfoxide reductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3090 | 359 aa hypothetical protein | |||
| 3095 | M | DNA (cytosine-5-)-methyltransferase | RCCGGY | M.Bdo12C01ORF3095P |
| 3100 | 72 aa hypothetical protein | |||
| 7510 | 124 aa hypothetical protein | |||
| 7515 | M | M.Bfr1985ORF18580P (66% identity) | YGGCCR | M.Bdo12C01ORF7490P |
| 7520 | 53 aa hypothetical protein HMPREF1065_02891 | |||
| 14030 | pseudogene | |||
| 14035 | R | Pdo17855ORF15140P (100% identity) | GGTNACC | Bdo12C01ORF770P |
| 14040 | M | M.Pdo17855ORF15140P (100% identity) | GGTNACC | M.Bdo12C01ORF770P |
| 14045 | 104 aa hypothetical protein | |||
| 15810 | 130 aa hypothetical protein | |||
| 15815 | M | M.BdoB010ORF11455P (98% identity) | M.Bdo12C01ORF412P | |
| 15820 | 78 aa hypothetical protein | |||
| 18410 | 288 aa hypothetical protein | |||
| 18415 | C | C.Pdo3C03ORF1413P (98% identity) | C.Bdo12C01ORF18420P | |
| 18420 | M | M.Pdo3C03ORF1413P (100% identity) | M.Bdo12C01ORF18420P | |
| 18425 | S | S.Pdo2ORF16265P (100% identity) | S.Bdo12C01ORF18420P | |
| 18430 | 1383 aa hypothetical protein | |||
| 18415 | pseudogene | |||
| 18420 | M | M.Pdo3C03ORF1413P (100% identity) | M.Bdo12C01ORF3632P | |
| 18425 | S | S.Pdo2ORF16265P (100% identity) | S.Bdo12C01ORF3632P | |
| 18430 | 1383 aa hypothetical protein | |||
| 19475 | 178 aa hypothetical protein | |||
| 19480 | M | M.Pvu191ORF10140P (86% identity) | M.Bdo12C01ORF19480P | |
| 19485 | 139 aa hypothetical protein | |||
| 19520 | 70 aa hypothetical protein | |||
| 19525 | M | M.Pvu1099ORF11120P (86% identity) | M.Bdo12C01ORF19525P | |
| 19530 | 115 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6780 | 297 aa hypothetical protein | |||
| 6785 | C | C.Pme12C32ORF2646P (100% identity) | C.Bdo12C01ORF3284P | |
| 6790 | M | M.Pme12C32ORF2646P (100% identity) | M.Bdo12C01ORF3284P | |
| 6795 | toxin Fic | |||
| 6800 | R | Pme12C32ORF2646P (99% identity) | Bdo12C01ORF3284P | |
| 6805 | 72 aa hypothetical protein | |||