Vibrio cholerae El Tor N16961 |
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Putative Vibrio cholerae El Tor N16961 RM systems
Ref: Heidelberg,J.F. et al. Nature 406 (6795), 477-483 (2000)
REBASE ref # 6438
| Sequence length: | GenBank #: | |
| chromosome I: | 2,961,149 bp | AE003852 (NC_002505) |
| chromosome II: | 1,072,315 bp | AE003853 (NC_002506) |
REBASE acronym: VchA
Org_num: 3007
All begin VC_, VC_A
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1764 | 706 aa hypothetical protein | |||
| 1765 | R | VchW413ORF6655P (100% identity) | VchAORF1769P | |
| 1766 | 663 aa conserved hypothetical protein | |||
| 1767 | 470 aa conserved hypothetical protein | |||
| 1768 | S | S.VchW413ORF6655P (100% identity) | S.VchAORF1769P | |
| 1769 | M | M.VspNIH41ORF1746P (100% identity) | M.VchAORF1769P | |
| 1770 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2625 | ribulose-phosphate 3-epimerase | |||
| 2626 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchADamP |
| 2627 | DamX-related protein | |||
| chromosome II | ||||
| 197 | GMP reductase | |||
| 198 | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.VchAI |
| 199 | 638 aa hypothetical protein | |||
| 446 | haemagglutinin | |||
| 447 | M | M.VspNIH41ORF3529P (100% identity) | M.VchAORF447P | |
| 448 | 141 aa hypothetical protein | |||