Escherichia coli Ecol_448 |
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Putative Escherichia coli Ecol_448 RM systems
Ref: Stoesser,N. et al. unpublished
REBASE ref # 21762
| Sequence length: | GenBank #: | |
| Chromosome: | 5,007,393 bp | CP015076 |
| plasmid pEC448_1: | 133,735 bp | CP015077 |
| plasmid pEC448_OXA163: | 71,170 bp | CP015078 |
REBASE acronym: Eco448
Org_num: 18809
All begin A4R37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23935 | 156 aa hypothetical protein | |||
| 23940 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco448ORF23945P |
| 23945 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco448ORF23945P |
| 23950 | R | EcosS9ORF4930P (99% identity) | AAAGNNNNGTT | Eco448ORF23945P |
| 23955 | 267 aa hypothetical protein | |||
| plasmid pEC448_OXA163 | ||||
| 25805 | transposase | |||
| 25810 | R | KpnN11aORF30P (100% identity) | Eco448ORF25820P | |
| 25815 | S | S.Eho916ORF18625P (97% identity) | S.Eco448ORF25820P | |
| 25820 | M | M.KpnN11aORF30P (100% identity) | M.Eco448ORF25820P | |
| 25825 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3375 | 71 aa hypothetical protein | |||
| 3380 | M | M.Sen21974ORF23385P (100% identity) | M.Eco448ORF3380P | |
| 3385 | 145 aa hypothetical protein | |||
| 8125 | drug/metabolite exporter YedA | |||
| 8130 | V | V.SflC32DcmP (74% identity) | V.Eco448DcmP | |
| 8135 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco448DcmP |
| 8140 | hydrolase | |||
| 15695 | Fis family transcriptional regulator | |||
| 15700 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco448ORF15700P |
| 15705 | 59 aa hypothetical protein | |||
| 16305 | ribulose-phosphate 3-epimerase | |||
| 16310 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco448DamP |
| 16315 | cell division protein DamX | |||
| 17885 | DNA repair protein | |||
| 17890 | RM | EcosR9ORF15335P (100% identity) | CANCATC | Eco448ORF17890P |
| 17895 | alkaline phosphatase | |||
| 21655 | histidine kinase | |||
| 21660 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco448ORF21660P |
| 21665 | 121 aa hypothetical protein | |||
| 21975 | transposase | |||
| 21980 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco448ORF21980P |
| 21985 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco448ORF21980P |
| 21990 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco448ORF21980P |
| 21995 | restriction endonuclease | |||
| plasmid pEC448_1 | ||||
| 25035 | 73 aa hypothetical protein | |||
| 25040 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco448ORF25040P | |
| 25045 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21990 | restriction endonuclease | |||
| 21995 | R | EcosS9McrCP (100% identity) | Eco448McrCP | |
| 22000 | restriction endonuclease | |||