Caldicellulosiruptor bescii DSM 6725 |
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Putative Caldicellulosiruptor bescii DSM 6725 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 11085
Complete sequence: 2,919,718 bp
GenBank #: CP001393 (NC_012034)
REBASE acronym: Cbe
Org_num: 5305
All begin Athe_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 861 | nicotinate phosphoribosyltransferase | |||
| ??? | M | M.Cla6AORF331P (22% identity) | M.CbeORF862AP | |
| 863 | transposase | |||
| ??? | M | M.CsaDORF2680P (74% identity) | M.CbeORF862BP | |
| 864 | transcriptional regulator | |||
| 865 | S | S.Ckr2002ORF1789P (64% identity) | S.CbeORF862P | |
| 867 | DNA polymerase beta domain protein region | |||
| 868 | protein of unknown function DUF86 | |||
| 869 | R | Csp104CORFDP (77% identity) | CbeORF862P | |
| 870 | protein of unknown function DUF45 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1587 | 97 aa conserved hypothetical protein | |||
| 1588 | M | M1.TceNA10ORFBP (92% identity) | GATC | M.CbeORF1588P |
| 1589 | pseudogene | |||
| 1599 | helicase domain protein | |||
| 1600 | M | M2.TceNA10ORFBP (95% identity) | M.CbeORF1600P | |
| 1601 | 200 aa conserved hypothetical protein | |||
| 1657 | 169 aa hypothetical protein | |||
| 1658 | M | M.Cla6AORF1764P (99% identity) | CCWGG | M.CbeORF1658P |
| 1659 | 267 aa hypothetical protein | |||
| 2016 | 119 aa conserved hypothetical protein | |||
| 2017 | M | M.CsaDORF1403P (92% identity) | M.CbeORF2017P | |
| 2018 | 457 aa conserved hypothetical protein | |||
| 2436 | transcriptional regulator, XRE family | |||
| 2437 | M | M.Ckr177II (93% identity) | GGCC | M.CbeI |
| 2438 | R | Chy108ORF409P (97% identity) | GGCC | CbeI |
| 2439 | integrase family protein | |||
| 2477 | 107 aa hypothetical protein | |||
| 2478 | M | M.TspITDORF1864P (58% identity) | M.CbeORF2478P | |
| 2479 | transposase, IS605 OrfB family | |||