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Putative Arthrospira platensis YZ RM systems
Ref: Xu,T. et al. unpublished
REBASE ref # 21717
Complete sequence: 6,520,772 bp
GenBank #: CP013008
REBASE acronym: AplYZ
Org_num: 18497
All begin AP285_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2800 | anthranilate phosphoribosyltransferase | |||
2805 | R | SplZORFAP (100% identity) | AplYZORF2805P | |
2810 | 244 aa hypothetical protein | |||
2815 | chromosome segregation protein SMC | |||
2820 | S | S.SplZORFAP (100% identity) | S.AplYZORF2825P | |
2825 | M | M.SplZORFAP (98% identity) | M.AplYZORF2825P | |
2830 | peptidase S1 | |||
3875 | 62 aa hypothetical protein | |||
3880 | M | DNA methyltransferase | M.AplYZORF3880P | |
3885 | 321 aa hypothetical protein | |||
4700 | 1,4-dihydroxy-2-naphthoate phytyltransferase | |||
4705 | M | M.SplZORFTP (99% identity) | M.AplYZORF4705P | |
4710 | S | S.SplZORFTP (99% identity) | S.AplYZORF4705P | |
4715 | methyltransferase | |||
4720 | 203 aa hypothetical protein | |||
4725 | 190 aa hypothetical protein | |||
4730 | R | SplZORFFP (99% identity) | AplYZORF4705P | |
4735 | metal-dependent hydrolase | |||
14285 | 232 aa hypothetical protein | |||
14290 | M | M.SplZORFCP (100% identity) | M.AplYZORF14290P | |
14295 | S | S.SplZORFCP (100% identity) | S.AplYZORF14290P | |
14300 | R | Asp9108ORF15455P (100% identity) | AplYZORF14290P | |
14305 | mannosyltransferase | |||
17410 | 472 aa hypothetical protein | |||
17415 | R | Asp9108ORF19130P (100% identity) | AplYZORF17435P | |
17420 | 99 aa hypothetical protein | |||
17425 | twitching motility protein PilT | |||
17430 | S | S.Asp9108ORF19130P (100% identity) | S.AplYZORF17435P | |
17435 | M | M.SplZORFBP (100% identity) | M.AplYZORF17435P | |
17440 | transcriptional regulator | |||
17455 | transposase | |||
17460 | R | Asp9108ORF19150P (87% identity) | AplYZORF17460P | |
17465 | 76 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1445 | DNA repair protein RecO | |||
??? | R | Asp9108ORF1515P (100% identity) | GRCGYC | AplYZORF1455P |
1455 | M | M.SplZORFNP (100% identity) | GRCGYC | M.AplYZORF1455P |
1460 | ATPase | |||
2550 | 98 aa hypothetical protein | |||
2555 | R | Asp9108ORF2700P (100% identity) | CCGCGG | AplYZORF2560P |
??? | M | M.AplPORF27965P (100% identity) | CCGCGG | M.AplYZORF2560P |
2565 | pseudogene | |||
2570 | transposase | |||
2575 | RM | AmaCSORF707P (98% identity) | AplYZORF2575P | |
2580 | 143 aa hypothetical protein | |||
3070 | helicase | |||
3075 | RM | Asp9108ORF3245P (99% identity) | AplYZORF3075P | |
3080 | DNA polymerase III subunit beta | |||
3860 | pseudogene | |||
3865 | M | M.SplZORFDP (100% identity) | CGTACG | M.AplYZORF3865P |
3870 | R | SplZORFDP (95% identity) | CGTACG | AplYZORF3865P |
3875 | 62 aa hypothetical protein | |||
4135 | 16S rRNA methyltransferase | |||
??? | M | M.Asp9108ORF4400P (100% identity) | TACGTA | M.AplYZORF4140P |
4150 | R | Asp9108ORF4400P (100% identity) | TACGTA | AplYZORF4140P |
4155 | C | C.Asp9108ORF4400P (100% identity) | C.AplYZORF4140P | |
4160 | poly(A) polymerase | |||
4710 | 418 aa hypothetical protein | |||
4715 | M | M.SplZORFUP (100% identity) | CCTNAGG | M.AplYZORF4715P |
4720 | 203 aa hypothetical protein | |||
10810 | 392 aa hypothetical protein | |||
10815 | RM | AplPORF16010P (49% identity) | AplYZORF10815BP | |
10820 | RM | Asp9108ORF11845P (100% identity) | AplYZORF10815AP | |
10825 | two-component system response regulator | |||
13540 | glutathione S-transferase | |||
13545 | M | M.Asp9108ORF14670P (100% identity) | GGTNACC | M.AplYZORFBP |
??? | R | Asp9108ORF14670P (100% identity) | GGTNACC | AplYZORFBP |
13555 | high light inducible protein | |||
13980 | RIP metalloprotease RseP | |||
13990 | M | M.SplZORFMP (100% identity) | GCSGC | M.AplYZORF13990P |
13995 | 3-oxoacyl-ACP synthase | |||
14070 | 91 aa hypothetical protein | |||
14075 | M | M.Asp9108ORF15215P (100% identity) | M.AplYZORF14075P | |
14080 | 142 aa hypothetical protein | |||
14510 | hemolysin | |||
14515 | M | M.SplZORFLP (96% identity) | CGATCG | M.AplYZORF14515P |
14520 | allophycocyanin | |||
15515 | 273 aa hypothetical protein | |||
15520 | M | M.Asp9108ORF16900P (100% identity) | GGYRCC | M.AplYZORF15520P |
15525 | R | Asp9108ORF16900P (100% identity) | GGYRCC | AplYZORF15520P |
15530 | cobalamin biosynthesis protein CobW | |||
16140 | recombinase | |||
16145 | M | M.Asp9108ORF17565P (100% identity) | M.AplYZORF16145P | |
16150 | 84 aa hypothetical protein | |||
18630 | LOR/SDH bifunctional protein | |||
18635 | M | M.SplZORFGP (100% identity) | GCTNAGC | M.AplYZORF18635P |
18640 | R | Asp9108ORF20455P (100% identity) | GCTNAGC | AplYZORF18635P |
18645 | ABC transporter permease | |||
18805 | 228 aa hypothetical protein | |||
18810 | RM | Asp9108ORF20650P (100% identity) | AplYZORF18810P | |
18815 | HNH endonuclease | |||
18900 | 265 aa hypothetical protein | |||
18905 | R | Asp9108ORF20760P (100% identity) | CTGCAG | AplYZORF18910P |
18910 | M | M.SplZORFOP (100% identity) | CTGCAG | M.AplYZORF18910P |
18915 | UDP-N-acetylglucosamine 2-epimerase | |||
19035 | S-adenosylmethionine decarboxylase proenzyme | |||
19040 | M | M.Asp9108ORF20865P (100% identity) | GATC | M.AplYZORF19040P |
19045 | group II intron reverse transcriptase/maturase | |||
19800 | 130 aa hypothetical protein | |||
19805 | C | C.AplPORF29535P (100% identity) | C.AplYZORF19815P | |
19810 | R | Asp9108ORF21810P (100% identity) | RCATGY | AplYZORF19815P |
19815 | M | M.Asp9108ORF21810P (100% identity) | RCATGY | M.AplYZORF19815P |
19820 | carbamoyl phosphate synthase large subunit | |||
21890 | M | M.Asp9108ORF24165P (100% identity) | M.AplYZORF21890P | |
21895 | AAA+ family ATPase | |||
22245 | restriction endonuclease | |||
22250 | M | M.Asp9108ORF24525P (96% identity) | GACNNNGTC | M.AplYZORF22250P |
??? | R | Lfu8579ORF7000P (20% identity) | GACNNNGTC | AplYZORF22250P |
22255 | MBL fold metallo-hydrolase | |||
23195 | alcohol dehydrogenase | |||
23200 | M | M.Asp9108ORF25595P (100% identity) | GGWCC | M.AplYZORF23200P |
23205 | guanine permease | |||
24845 | recombinase | |||
24850 | M | M.Asp9108ORF27410P (100% identity) | M.AplYZORF24850P | |
24855 | 84 aa hypothetical protein | |||
25125 | 86 aa hypothetical protein | |||
25130 | R | Asp9108ORF27710P (100% identity) | ACCGGT | AplYZORF25135P |
25135 | M | M.Asp9108ORF27710P (100% identity) | ACCGGT | M.AplYZORF25135P |
25140 | pseudogene | |||
25825 | pseudogene | |||
25830 | M | M.SplZORFKP (100% identity) | M.AplYZORF25830P | |
25835 | 359 aa hypothetical protein | |||
26465 | 81 aa hypothetical protein | |||
??? | RM | Asp9108ORF29055P (100% identity) | AplYZORF26475P | |
26480 | 116 aa hypothetical protein | |||
26465 | 81 aa hypothetical protein | |||
??? | RM | Asp9108ORF29055P (100% identity) | AplYZORFAP | |
26480 | 116 aa hypothetical protein | |||
26590 | recombinase | |||
26595 | M | M.Asp9108ORF29180P (100% identity) | M.AplYZORF26595P | |
26600 | 102 aa hypothetical protein | |||
27965 | cysteine lyase | |||
27970 | M | M.SplZORFRP (100% identity) | ATGCAT | M.AplYZORF27970P |
27975 | R | SplZORFRP (100% identity) | ATGCAT | AplYZORF27970P |
27980 | phosphoribosyltransferase | |||
28310 | 84 aa hypothetical protein | |||
28315 | M | M.Asp9108ORF31020P (99% identity) | M.AplYZORF28315P | |
28520 | 175 aa hypothetical protein | |||
28525 | M | M.AplPORF18860P (100% identity) | TTCGAA | M.AplYZORF28525P |
28530 | R | Asp9108ORF31225P (100% identity) | TTCGAA | AplYZORF28525P |
28535 | 346 aa hypothetical protein | |||
29435 | asparagine synthase | |||
29440 | M | M.Asp9108DndDP (100% identity) | M.AplYZDndDP | |
29445 | sulfurtransferase DndC | |||
29440 | DNA sulfur modification protein DndD | |||
29445 | M | M.Asp9108DndCP (100% identity) | M.AplYZDndCP | |
29450 | 526 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
22240 | 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase | |||
22245 | R | Asp9108MrrP (100% identity) | AplYZMrrP | |
22250 | DNA methylase |