Halorubrum lacusprofundi ATCC 49239 |
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Putative Halorubrum lacusprofundi ATCC 49239 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 22661
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,735,295 bp | CP001365 (NC_012029) |
| chromosome 2: | 525,943 bp | CP001366 (NC_012028) |
| plasmid pHLAC01: | 431,338 bp | CP001367 (NC_012030) |
REBASE acronym: Hla49239
Org_num: 3790
All begin Hlac_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1928 | 98 aa hypothetical protein | |||
| 1929 | M | M.Hsa16337ORFHP (93% identity) | GATC | M.Hla49239ORF1929P |
| 1930 | UspA domain protein | |||
| chromosome 2 | ||||
| 2760 | 93 aa hypothetical protein | |||
| 2761 | M | M.HspDL1ORF3670P (99% identity) | AGGCCT | M.Hla49239ORF2761P |
| 2762 | 178 aa hypothetical protein | |||
| 2855 | transposase (ISH3) | |||
| 2856 | RM | HarDL31ORF231P (45% identity) | Hla49239ORF2856P | |
| 2857 | transposase IS4 family protein | |||
| 3188 | PglZ domain protein | |||
| 3189 | RM | HspSJ27ORFDP (61% identity) | Hla49239ORF3189P | |
| 3190 | transposase | |||
| 3218 | 105 aa hypothetical protein | |||
| 3219 | RM | Hli22187ORF11317P (81% identity) | Hla49239ORF3219P | |
| 3220 | 244 aa hypothetical protein | |||
| plasmid pHLAC01 | ||||
| 3284 | 63 aa conserved hypothetical protein | |||
| 3285 | RM | Hsp22S1ORFAP (60% identity) | Hla49239ORF3285P | |
| 3286 | helicase domain protein | |||
| 3320 | orc1/cdc6 family replication initiation protein | |||
| 3321 | M | M.HspDM2ORF2764P (94% identity) | GATC | M.Hla49239ORF3321P |
| 3322 | Mrr family endonuclease | |||
| 3346 | PglZ domain protein | |||
| 3347 | M | M.NspAArc1ORF4059P (97% identity) | AGGCCT | M.Hla49239ORF3347P |
| 3348 | 132 aa conserved hypothetical protein | |||
| 3348 | 132 aa conserved hypothetical protein | |||
| 3349 | M | M.NarCCL63ORFIP (94% identity) | M.Hla49239ORF3349P | |
| 3350 | 358 aa hypothetical protein | |||
| 3437 | helicase domain protein | |||
| 3438 | RM | Hla49239ORF3570P (73% identity) | Hla49239ORF3438P | |
| 3439 | transposase IS4 family protein | |||
| 3569 | transposase IS4 family protein | |||
| 3570 | RM | Hla49239ORF3438P (73% identity) | Hla49239ORF3570P | |
| 3571 | transposase (ISH6) | |||
| 3601 | 31 aa hypothetical protein | |||
| 3602 | R | Nve54ORF16560P (70% identity) | CCWGG | Hla49239IP |
| 3603 | M | M.Nve54ORF16560P (79% identity) | CCWGG | M.Hla49239I |
| 3604 | transposase , partial | |||
| 3626 | 319 aa hypothetical protein | |||
| 3627 | RM | HspYSMS36ORFCP (50% identity) | Hla49239ORF3627P | |
| 3628 | transposase (ISH3) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pHLAC01 | ||||
| 3321 | DNA adenine methylase | |||
| 3322 | R | HspT3MrrP (91% identity) | Hla49239Mrr5P | |
| 3323 | 340 aa hypothetical protein | |||
| 3351 | transposase (ISH3) | |||
| 3352 | R | ATPase associated with various cellular | Hla49239McrBP | |
| 3353 | 60 aa hypothetical protein | |||