Pediococcus damnosus TMW 2.1533 |
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Putative Pediococcus damnosus TMW 2.1533 RM systems
Ref: Behr,J. et al. PLoS ONE 11 (3), E0152747 (2016)
REBASE ref # 21709
| Sequence length: | GenBank #: | |
| Chromosome: | 2,149,374 bp | CP012275 |
| plasmid pL21533-4: | 38,024 bp | CP012279 |
| plasmid pL21533-6: | 14,075 bp | CP012281 |
| plasmid pL21533-7: | 39,658 bp | CP012282 |
REBASE acronym: Pda1533
Org_num: 18482
All begin ADU70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | 2,3-butanediol dehydrogenase, S-alcohol forming, | |||
| 1801 | R | Pda1535ORF890P (99% identity) | Pda1533ORF1803P | |
| 1803 | M | M.Pda1536ORF1406P (100% identity) | M.Pda1533ORF1803P | |
| 1804 | S | S.Pda1535ORF890P (100% identity) | S.Pda1533ORF1803P | |
| 1805 | Integrase | |||
| plasmid pL21533-7 | ||||
| 98 | 118 aa Hypothetical protein | |||
| ??? | S | S.Pda1535ORF2328P (99% identity) | S.Pda1533ORF101P | |
| ??? | M | M.Pda1535ORF2328P (99% identity) | M.Pda1533ORF101P | |
| ??? | R | Pda1535ORF2328P (96% identity) | Pda1533ORF101P | |
| 112 | 172 aa Hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pL21533-4 | ||||
| 65 | Translation-disabling ACNase RloC | |||
| 66 | RM | LbrNSMJ23ORF12660P (99% identity) | Pda1533ORF66P | |
| 67 | M | M.LbrNSMJ23ORF12660P (100% identity) | CTSAG | M.Pda1533ORF66P |
| 68 | resolvase | |||
| plasmid pL21533-6 | ||||
| 2 | 61 aa Hypothetical protein | |||
| 3 | RM | LpaNSMJ16ORF2095P (60% identity) | Pda1533ORF3P | |
| 4 | 506 aa Hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | Integrase | |||
| 1806 | R | Pda1535MrrP (100% identity) | Pda1533MrrP | |
| 1807 | 78 aa Hypothetical protein | |||