Escherichia coli LF82 |
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Putative Escherichia coli LF82 RM systems
Ref: Peyretaillade,E. et al. unpublished
REBASE ref # 10926
| Sequence length: | GenBank #: | |
| Chromosome: | 4,773,108 bp | CU651637 (NC_011993) |
| plasmid LF82: | 108,379 bp | CU638872 |
REBASE acronym: EcoLF82
Org_num: 5301
All begin LF82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3490 | 113 aa hypothetical protein yjiW | |||
| 737 | S | S.EcosLF82ORF3455P (100% identity) | S.EcoLF82ORF738P | |
| 738 | M | M.EcosLF82ORF3455P (100% identity) | M.EcoLF82ORF738P | |
| 739 | R | EcosLF82ORF3455P (100% identity) | EcoLF82ORF738P | |
| 740 | 550 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2949 | Uncharacterized inner membrane transporter yedA | |||
| 2418 | V | V.Fnu048DcmP (100% identity) | V.EcoLF82DcmP | |
| 444 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoLF82DcmP |
| 2954 | Uncharacterized protein yedJ | |||
| 407 | replication protein for prophage | |||
| 408 | M | M.EcosLF82ORF17195P (100% identity) | GATC | M.EcoLF82ORF408P |
| 409 | 71 aa hypothetical protein ybiI | |||
| 667 | DNA-binding protein fis | |||
| 3263 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoLF82ORF3263P |
| 3268 | Uncharacterized protein yhdU | |||
| 1920 | ribulose-phosphate 3-epimerase | |||
| 435 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoLF82DamP |
| 436 | Protein damX | |||
| plasmid LF82 | ||||
| ??? | 76 aa Hypothetical protein | |||
| ??? | M | M.Sso524ORF460P (100% identity) | GATC | M.EcoLF82Dam3P |
| ??? | 269 aa Hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 811 | 120 aa hypothetical protein Hbal_2272 | |||
| 719 | M | M.EcosLF82ORF3195P (100% identity) | M.EcoLF82ORF719P | |
| 720 | R | EcosLF82ORF3195P (97% identity) | EcoLF82ORF719P | |
| 3477 | Uncharacterized protein yjhS | |||