Oscillatoriales cyanobacterium MTP1 |
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Putative Oscillatoriales cyanobacterium MTP1 RM systems
Ref: Hallenbeck,P.C. et al. Genome Announc 4 (1), e01571-15 (2016)
REBASE ref # 21391
Contig set: 7,647,882 bp
GenBank #: LNAA00000000 (NZ_LNAA00000000)
REBASE acronym: OcyMTP1
Org_num: 18444
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5103 | 371 aa hypothetical protein | |||
| 5106 | R | CthOC1ORFRP (100% identity) | OcyMTP1ORFAP | |
| 5111 | 127 aa hypothetical protein | |||
| 5112 | 107 aa hypothetical protein | |||
| 5113 | S | S2.CthOC1ORFRP (100% identity) | S1.OcyMTP1ORFAP | |
| 5117 | S | S1.CthOC1ORFRP (100% identity) | S2.OcyMTP1ORFAP | |
| 5120 | M | M.CthOC1ORFRP (100% identity) | M.OcyMTP1ORFAP | |
| 5128 | HTH domain-containing protein, XRE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 80 | universal stress protein UspE | |||
| 82 | M | M.TorNK122ORF17815P (65% identity) | M.OcyMTP1ORFWP | |
| 83 | iron ABC transporter substrate-binding protein | |||
| 106 | 119 aa hypothetical protein | |||
| 107 | M | M.CthOC1ORFAP (100% identity) | GATC | M.OcyMTP1ORFQP |
| 111 | 155 aa hypothetical protein | |||
| 162 | 154 aa hypothetical protein | |||
| 163 | RM | CthOC1ORFXP (100% identity) | OcyMTP1ORFUP | |
| 169 | 89 aa hypothetical protein | |||
| 525 | 72 aa hypothetical protein | |||
| 527 | M | M.CthOC1ORFTP (100% identity) | TTAA | M.OcyMTP1ORFTP |
| 531 | 473 aa hypothetical protein | |||
| 585 | 116 aa hypothetical protein | |||
| 586 | M | M.CthOC1ORFUP (100% identity) | CAGCTG | M.OcyMTP1ORFSP |
| 590 | 72 aa hypothetical protein | |||
| 1167 | DNA ligase ) LigA | |||
| 1173 | M | M.CthOC1ORFCP (100% identity) | GGCC | M.OcyMTP1ORFOP |
| 1174 | 77 aa hypothetical protein | |||
| 1183 | 116 aa hypothetical protein | |||
| 1184 | M | M.CthOC1ORFBP (100% identity) | RGATCY | M.OcyMTP1ORFPP |
| 1186 | R | CthOC1ORFBP (100% identity) | RGATCY | OcyMTP1ORFPP |
| 1191 | glyoxalase | |||
| 1270 | 72 aa hypothetical protein | |||
| 1272 | M | M.CthOC1ORFLP (100% identity) | TCGCGA | M.OcyMTP1ORFDP |
| 1274 | R | CthOC1ORFLP (100% identity) | TCCGGA | OcyMTP1ORFDP |
| 1278 | C | C.CthOC1ORFLP (100% identity) | C.OcyMTP1ORFDP | |
| 1279 | 143 aa hypothetical protein | |||
| 1413 | 65 aa hypothetical protein | |||
| 1415 | M | M.CthOC1ORFMP (100% identity) | M.OcyMTP1ORFKP | |
| 1432 | 182 aa hypothetical protein | |||
| 1454 | helicase | |||
| 1462 | RM | CthOC1ORFEP (100% identity) | OcyMTP1ORFMP | |
| 1483 | 114 aa hypothetical protein | |||
| 1713 | 201 aa hypothetical protein | |||
| 1717 | M | M.CthOC1ORFNP (100% identity) | TCTAGA | M.OcyMTP1ORFJP |
| 1719 | R | CthOC1ORFNP (100% identity) | TCTAGA | OcyMTP1ORFJP |
| 1722 | 248 aa hypothetical protein | |||
| 2288 | 308 aa hypothetical protein | |||
| 2291 | M | M.CthOC1ORFFP (100% identity) | GACNNNGTC | M.OcyMTP1ORFLP |
| 2294 | 134 aa hypothetical protein | |||
| 2295 | 83 aa hypothetical protein | |||
| 2297 | M | M.CthsBORF5130P (84% identity) | M.OcyMTP1ORFIP | |
| 2300 | R | CthOC1ORFKP (100% identity) | GTMKAC | OcyMTP1ORFIP |
| 2302 | 194 aa hypothetical protein | |||
| 2495 | 133 aa hypothetical protein | |||
| 2497 | M | M.CthOC1ORFJP (100% identity) | M.OcyMTP1ORFHP | |
| 2502 | 63 aa hypothetical protein | |||
| 3282 | 76 aa hypothetical protein | |||
| 3283 | M | M.CthOC1ORFIP (100% identity) | GGCC | M.OcyMTP1ORFGP |
| 3285 | 122 aa hypothetical protein | |||
| 3688 | HEAT repeat-containing protein | |||
| 3692 | M | M.CthOC1ORFPP (100% identity) | M.OcyMTP1ORFCP | |
| 3695 | R | CthOC1ORFPP (100% identity) | OcyMTP1ORFCP | |
| 3698 | 316 aa hypothetical protein | |||
| 4149 | 515 aa hypothetical protein | |||
| 4157 | M | M.CthOC1ORFGP (100% identity) | AATT | M.OcyMTP1ORFEP |
| 4158 | adenine-specific DNA methylase | |||
| 4157 | Adenine-specific DNA methylase | |||
| 4158 | M | M.CthOC1ORFHP (100% identity) | CATG | M.OcyMTP1ORFFP |
| 4161 | 176 aa hypothetical protein | |||
| 5135 | 130 aa hypothetical protein | |||
| 5137 | M | M.CthOC1ORFQP (100% identity) | CCSGG | M.OcyMTP1ORFBP |
| 5142 | R | CthOC1ORFQP (100% identity) | CCSGG | OcyMTP1ORFBP |
| 5145 | 119 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 900 | 85 aa hypothetical protein | |||
| 901 | R | CthOC1ORFWP (100% identity) | OcyMTP1ORFRP | |
| 907 | 61 aa hypothetical protein | |||
| 908 | 120 aa hypothetical protein | |||
| 909 | 176 aa hypothetical protein | |||
| 910 | nucleotidyltransferase | |||
| 911 | 101 aa hypothetical protein | |||
| 912 | 98 aa hypothetical protein | |||
| 913 | 94 aa hypothetical protein | |||
| 914 | 70 aa hypothetical protein | |||
| 915 | 93 aa hypothetical protein | |||
| 916 | 82 aa hypothetical protein | |||
| 918 | M | M.CthOC1ORFWP (100% identity) | M.OcyMTP1ORFRP | |
| 925 | 132 aa hypothetical protein | |||
| 1506 | 153 aa hypothetical protein | |||
| 1507 | M | M.CthOC1ORFDP (100% identity) | M.OcyMTP1ORFNP | |
| 1512 | 102 aa hypothetical protein | |||
| 1513 | 212 aa hypothetical protein | |||
| 1514 | 72 aa hypothetical protein | |||
| 1515 | 110 aa hypothetical protein | |||
| 1516 | R | CthOC1ORFDP (100% identity) | OcyMTP1ORFNP | |
| 1522 | 206 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 134 | 95 aa hypothetical protein | |||
| 135 | R | LsiA121MrrP (98% identity) | OcyMTP1Mrr2P | |
| 136 | 80 aa hypothetical protein O77CONTIG1_04468 | |||
| 2878 | 93 aa hypothetical protein | |||
| 2879 | R | CthOC1MrrP (100% identity) | OcyMTP1MrrP | |
| 2881 | 110 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 136 | 192 aa hypothetical protein | |||
| 138 | M | M.Gsp7407ORF1095P (53% identity) | GATC | M.OcyMTP1ORFVP |
| 140 | 82 aa hypothetical protein | |||