Shigella species PAMC 28760 |
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Putative Shigella species PAMC 28760 RM systems
Ref: Park,H. unpublished
REBASE ref # 21582
Complete sequence: 4,558,287 bp
GenBank #: CP014768
REBASE acronym: Ssp28760
Org_num: 18620
All begin A0259_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3440 | 113 aa hypothetical protein | |||
| ??? | S | S1.EcoC41ORF22240P (100% identity) | S1.Ssp28760ORF3465P | |
| 3450 | transposase | |||
| 3455 | transposase | |||
| 3460 | S | S2.EcoC41ORF22240P (100% identity) | S2.Ssp28760ORF3465P | |
| 3465 | M | M.EcosBORF22035P (100% identity) | M.Ssp28760ORF3465P | |
| 3470 | R | EcosBORF22035P (100% identity) | Ssp28760ORF3465P | |
| 3475 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14345 | transcription factor | |||
| 14350 | R | EcosBORF10585P (100% identity) | Ssp28760ORF14350P | |
| 14355 | 221 aa hypothetical protein | |||
| 20040 | Fis family transcriptional regulator | |||
| 20045 | M | M.SflSTLE1ORF2255P (100% identity) | ATGCAT | M.Ssp28760ORF20045P |
| 20050 | 59 aa hypothetical protein | |||
| 20685 | ribulose-phosphate 3-epimerase | |||
| 20690 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ssp28760DamP |
| 20695 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3425 | helicase | |||
| ??? | R | SflFF12McrCP (100% identity) | Ssp28760McrCP | |
| 3435 | R | SflFF12McrBP (100% identity) | Ssp28760McrBP | |
| 3440 | 113 aa hypothetical protein | |||
| 3470 | DEAD/DEAH box helicase | |||
| 3475 | R | SflFF24MrrP (100% identity) | Ssp28760MrrP | |
| 3480 | GTP-binding protein | |||