Escherichia coli 55989 |
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Putative Escherichia coli 55989 RM systems
Ref: Genoscope -,C.E.A. unpublished
REBASE ref # 10128
Complete sequence: 5,154,862 bp
GenBank #: CU928145 (NC_011748)
REBASE acronym: Eco55989
Org_num: 5274
All begin EC55989_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5009 | 113 aa conserved hypothetical protein | |||
| 5010 | S | S.SspS13ORF3945P (100% identity) | S.Eco55989ORF5011P | |
| 5011 | M | M.SflTORF4636P (100% identity) | M.Eco55989ORF5011P | |
| 5012 | R | SspS13ORF3945P (100% identity) | Eco55989ORF5011P | |
| 5013 | 557 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1035 | 145 aa conserved hypothetical protein from phage | |||
| 1036 | M | M.Eco10958ORF2018P (100% identity) | M.Eco55989ORF1036P | |
| 1037 | 84 aa hypothetical protein | |||
| 1048 | 94 aa conserved hypothetical protein from | |||
| 1049 | M | M.Spn7978ORF3515P (99% identity) | A | M.Eco55989ORF1049P |
| 1050 | 620 aa conserved hypothetical protein from phage | |||
| 2180 | 306 aa conserved hypothetical protein; putative inner | |||
| 2181 | V | V.SsoSE61DcmP (100% identity) | V.Eco55989DcmP | |
| 2182 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco55989DcmP |
| 2183 | metal-dependent phosphohydrolase | |||
| 3675 | global DNA-binding transcriptional dual | |||
| 3676 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco55989ORF3676P |
| 3677 | 59 aa conserved hypothetical protein; putative | |||
| 3791 | D-ribulose-5-phosphate 3-epimerase | |||
| 3792 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco55989DamP |
| 3793 | 428 aa conserved hypothetical protein | |||
| 4831 | exported surface protein precursor | |||
| 4832 | R | SflFF24DptFP (100% identity) | Eco55989DptFP | |
| 4833 | 441 aa conserved hypothetical protein | |||
| 4832 | 549 aa conserved hypothetical protein | |||
| 4833 | R | SflFF24DptGP (100% identity) | Eco55989DptGP | |
| 4834 | 1691 aa conserved hypothetical protein | |||
| 4833 | 441 aa conserved hypothetical protein | |||
| 4834 | R | EcoKG8DptHP (100% identity) | Eco55989DptHP | |
| 4835 | 172 aa hypothetical protein; putative membrane protein | |||
| 4837 | 197 aa conserved hypothetical protein | |||
| 4838 | M | M.SflFF24DndEP (100% identity) | M.Eco55989DndEP | |
| 4839 | ATPase involved in DNA thiolation | |||
| 4838 | DNA thiolation protein; putative phage | |||
| 4839 | M | M.EcoEC98DndDP (100% identity) | M.Eco55989DndDP | |
| 4840 | DNA thiolation protein; putative phage | |||
| 4839 | ATPase involved in DNA thiolation | |||
| 4840 | M | M.SflFF24DndCP (100% identity) | M.Eco55989DndCP | |
| 4841 | DNA thiolation protein; putative phage | |||
| 4840 | DNA thiolation protein; putative phage | |||
| 4841 | M | M.SflFF24DndBP (100% identity) | M.Eco55989DndBP | |
| 4842 | 50 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3267 | 795 aa conserved hypothetical protein putative serine | |||
| 3268 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco55989ORF3268P |
| 3269 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco55989ORF3268P |
| 3270 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5007 | fragment of conserved hypothetical protein (part | |||
| 5008 | R | EcoM1887GmrSDP (65% identity) | Eco55989GmrDP | |
| 5009 | 113 aa conserved hypothetical protein | |||