Escherichia coli ED1a |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli ED1a RM systems
Ref: Genoscope -,C.E.A. unpublished
REBASE ref # 10128
Complete sequence: 5,209,548 bp
GenBank #: CU928162 (NC_011745)
REBASE acronym: EcoED
Org_num: 5273
All begin ECED1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 288 | 325 aa conserved hypothetical protein, YhgA-like | |||
| ??? | M | M.EcoO81ORFAP (100% identity) | M.EcoEDORF289P | |
| 292 | fragment of putative lysine aminomutase | |||
| 2279 | 594 aa conserved hypothetical protein | |||
| 2280 | S | S.Sen64034II (100% identity) | S.EcoEDORF2281P | |
| 2281 | M | M.Sen64034II (100% identity) | M.EcoEDORF2281P | |
| 5211 | 132 aa conserved hypothetical protein | |||
| 5212 | S | S.EcoO81ORFCP (100% identity) | S.EcoEDORF5213P | |
| 5213 | M | M.EcoO81ORFCP (100% identity) | M.EcoEDORF5213P | |
| 5214 | R | EcoO81ORFCP (100% identity) | EcoEDORF5213P | |
| 5215 | fragment of conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 911 | 78 aa hypothetical protein | |||
| 912 | M | M.EcoR5ORF15805P (100% identity) | GATC | M.EcoEDORF912P |
| 913 | 62 aa hypothetical protein | |||
| 1020 | 106 aa conserved hypothetical protein from | |||
| 1021 | M | M.EcoO81ORFDP (100% identity) | M.EcoEDORF1021P | |
| 1022 | 660 aa conserved hypothetical protein from phage | |||
| 1422 | 94 aa conserved hypothetical protein from | |||
| ??? | M | M.EcoO81ORFEP (100% identity) | M.EcoEDORF1423P | |
| 1425 | 142 aa conserved hypothetical protein, putative TolA | |||
| 2116 | LexA repressor | |||
| 2117 | M | M.EcoO81Dam3P (100% identity) | GATC | M.EcoEDORF2117P |
| 2118 | 164 aa conserved hypothetical protein; CPS-53 (KpLE1) | |||
| 2226 | 306 aa conserved hypothetical protein; putative inner | |||
| 2227 | V | V.EcoTH9F11DcmP (100% identity) | V.EcoEDDcmP | |
| 2228 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoEDDcmP |
| 2229 | metal-dependent phosphohydrolase | |||
| 2540 | 77 aa conserved hypothetical protein from prophage | |||
| 2541 | M | M.EcoSTEC346ORFJP (100% identity) | GATC | M.EcoEDORF2541P |
| 2542 | prophage protein ninB | |||
| 3097 | bacteriophage replication gene A | |||
| 3098 | M | M.EcoO81Dam5P (100% identity) | GATC | M.EcoEDORF3098P |
| 3100 | transposase ORF B, IS1 | |||
| 3545 | TraT complement resistance protein precursor | |||
| 3546 | S | S.EcoO81ORFHP (100% identity) | S.EcoEDORF3546P | |
| 3547 | RM | EcoR43ORF19470P (100% identity) | EcoEDORF3546P | |
| 3548 | Diacylglycerol kinase (Diglyceride kinase) | |||
| 3920 | global DNA-binding transcriptional dual | |||
| 3921 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoEDORF3921P |
| 3922 | 59 aa conserved hypothetical protein; putative | |||
| 4044 | D-ribulose-5-phosphate 3-epimerase | |||
| 4045 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEDDamP |
| 4046 | 428 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2294 | SpnT protein | |||
| 2295 | M | M.EcoSCU147ORF4385P (99% identity) | M.EcoEDORF2295P | |
| 2296 | R | EcoO81ORFBP (100% identity) | EcoEDORF2295P | |
| 2297 | PilV-like protein | |||
| 5191 | 50 aa Conserved hypothetical protein (fragment) | |||
| 5192 | R | EcoSCI07ORF21551P (55% identity) | AGACC | EcoEDORF5192P |
| 5193 | 326 aa conserved hypothetical protein | |||