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Putative Treponema denticola ATCC 35405 RM systems
Ref: Seshadri,R. et al. Proc. Natl. Acad. Sci. U.S.A. 101 (15), 5646-5651 (2004)
REBASE ref # 7604
Complete sequence: 2,843,201 bp
GenBank #: AE017226 (NC_002967)
REBASE acronym: Tde
Org_num: 3489
All begin TDE_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
365 | 232 aa conserved hypothetical protein | |||
366 | R | TdeCF188IP (100% identity) | CNACNNNNNNTTC | TdeVIP |
367 | 339 aa conserved hypothetical protein | |||
??? | S | S.TdeCF188I (100% identity) | CNACNNNNNNTTC | S.TdeVI |
369 | M | M.TdeCF188I (100% identity) | CNACNNNNNNTTC | M.TdeVI |
370 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |||
2739 | membrane protein, putative | |||
2740 | S | S3.TdeVIIP (100% identity) | S.TdeORF2746AP | |
2741 | 259 aa conserved hypothetical protein | |||
??? | S | S2.TdeVIIP (100% identity) | S.TdeORF2746BP | |
??? | type I restriction-modification system subunit S | |||
??? | type I restriction-modification system, S subunit, truncation, partial | |||
??? | S | S1.Tde33520ORFFP (0% identity) | CAGNNNNNNNTDCC | S.TdeVII |
2745 | fic family protein | |||
2746 | M | M.Tpu758ORF7050P (0% identity) | CAGNNNNNNNTDCC | M.TdeVII |
2747 | R | Tpu758ORF7050P (0% identity) | CAGNNNNNNNTDCC | TdeVIIP |
2748 | acetyltransferase, GNAT family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
226 | 99 aa hypothetical protein | |||
227 | M | M.Tde35405aIII (100% identity) | CTCTTC | M.TdeII |
228 | R | TdeCF188VP (100% identity) | CTCTTC | TdeII |
229 | ATPase family protein | |||
705 | SPFH domain/Band 7 family protein | |||
706 | M | M.TdeCF188IV (100% identity) | RAATTY | M.TdeV |
707 | membrane protein, putative | |||
908 | ABC transporter, ATP-binding/permease protein | |||
909 | M | M.TdeCF188III (100% identity) | GGNCC | M.TdeIII |
910 | 570 aa conserved hypothetical protein | |||
911 | R | TdeCF188IIIP (100% identity) | GGNCC | TdeIII |
912 | 32 aa hypothetical protein | |||
1267 | phosphoribosylamine--glycine ligase | |||
1268 | R | TdeCF188ORF460P (100% identity) | GATC | TdeI |
1269 | 229 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
98 | conserved domain protein | |||
99 | M | M.TdeCF188II (100% identity) | CTAAT | M.TdeIV |
100 | 656 aa conserved hypothetical protein |