Ref: Seshadri,R. et al. Proc. Natl. Acad. Sci. U.S.A. 101 (15), 5646-5651 (2004)

REBASE ref # 7604

Complete sequence: 2,843,201 bp

GenBank #: AE017226 (NC_002967)

REBASE acronym: Tde

Org_num: 3489

 

All begin TDE_

Type I
ORF Gene Most similar Specificity Name
 
365 232 aa conserved hypothetical protein
366 R TdeCF188IP (100% identity) CNACNNNNNNTTC TdeVIP
367 339 aa conserved hypothetical protein
??? S S.TdeCF188I (100% identity) CNACNNNNNNTTC S.TdeVI
369 M M.TdeCF188I (100% identity) CNACNNNNNNTTC M.TdeVI
370 UDP-N-acetylmuramoylalanine--D-glutamate ligase
 
2739 membrane protein, putative
2740 S S3.TdeVIIP (100% identity) S.TdeORF2746AP
2741 259 aa conserved hypothetical protein
??? S S2.TdeVIIP (100% identity) S.TdeORF2746BP
??? type I restriction-modification system subunit S
 
??? type I restriction-modification system, S subunit, truncation, partial
??? S S1.Tde33520ORFFP (0% identity) CAGNNNNNNNTDCC S.TdeVII
2745 fic family protein
2746 M M.Tpu758ORF7050P (0% identity) CAGNNNNNNNTDCC M.TdeVII
2747 R Tpu758ORF7050P (0% identity) CAGNNNNNNNTDCC TdeVIIP
2748 acetyltransferase, GNAT family
Type II
ORF Gene Most similar Specificity Name
 
226 99 aa hypothetical protein
227 M M.Tde35405aIII (100% identity) CTCTTC M.TdeII
228 R TdeCF188VP (100% identity) CTCTTC TdeII
229 ATPase family protein
 
705 SPFH domain/Band 7 family protein
706 M M.TdeCF188IV (100% identity) RAATTY M.TdeV
707 membrane protein, putative
 
908 ABC transporter, ATP-binding/permease protein
909 M M.TdeCF188III (100% identity) GGNCC M.TdeIII
910 570 aa conserved hypothetical protein
911 R TdeCF188IIIP (100% identity) GGNCC TdeIII
912 32 aa hypothetical protein
 
1267 phosphoribosylamine--glycine ligase
1268 R TdeCF188ORF460P (100% identity) GATC TdeI
1269 229 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
98 conserved domain protein
99 M M.TdeCF188II (100% identity) CTAAT M.TdeIV
100 656 aa conserved hypothetical protein
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