Psychrobacter species P2G3 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Psychrobacter species P2G3 RM systems
Ref: Moghadam,M.S. et al. BMC Genomics 17 (1), 117 (2016)
REBASE ref # 21496
| Sequence length: | GenBank #: | |
| Chromosome: | 3,321,751 bp | CP012529 |
| plasmid pPspP2G3b: | 11,297 bp | CP012531 |
REBASE acronym: PspP2G3
Org_num: 18194
All begin AK823_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5340 | metal-dependent hydrolase | |||
| 5345 | R | Psp23AORF5085P (97% identity) | PspP2G3ORF5365P | |
| 5350 | 839 aa hypothetical protein | |||
| 5355 | 614 aa hypothetical protein | |||
| 5360 | S | S.Ssp305ORF12835P (29% identity) | S.PspP2G3ORF5365P | |
| ??? | M | M.Psp23AORF5085P (90% identity) | M.PspP2G3ORF5365P | |
| 5375 | 688 aa hypothetical protein | |||
| 12865 | pseudogene | |||
| 12870 | R | Psp27889ORF3520P (90% identity) | PspP2G3ORF12885P | |
| 12875 | 365 aa hypothetical protein | |||
| 12880 | S | S.Paq56ORF172P (54% identity) | S.PspP2G3ORF12885P | |
| ??? | M | M.Pst18903ORF869P (84% identity) | M.PspP2G3ORF12885P | |
| 12895 | 382 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 895 | 188 aa hypothetical protein | |||
| 900 | R | Pst18900ORF257P (84% identity) | GATC | PspP2G3ORF900P |
| 905 | aminodeoxychorismate lyase | |||
| plasmid pPspP2G3b | ||||
| 13750 | 118 aa hypothetical protein | |||
| 13755 | RM | PspPRORF2393P (68% identity) | PspP2G3ORF13755P | |
| 13760 | 131 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4675 | ATP-dependent helicase | |||
| 4680 | M | M.PspMn1ORF2820P (66% identity) | M.PspP2G3ORF4680P | |
| 4685 | R | PspMn1ORF2820P (85% identity) | PspP2G3ORF4680P | |
| 4690 | 111 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1525 | 203 aa hypothetical protein | |||
| 1530 | R | PspG5McrB2P (97% identity) | PspP2G3McrBP | |
| 1535 | R | PspG5McrC2P (95% identity) | PspP2G3McrCP | |
| 1555 | AraC family transcriptional regulator | |||