Peptoclostridium difficile 08ACD0030 |
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Putative Peptoclostridium difficile 08ACD0030 RM systems
Ref: Kosowan,T. and Golding,G. unpublished
REBASE ref # 21469
Complete sequence: 4,167,076 bp
GenBank #: CP010888
REBASE acronym: Pdi30
Org_num: 18171
All begin TW87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18290 | 687 aa hypothetical protein | |||
| ??? | R | CdiEW81IIIP (100% identity) | TAGNNNNNRTGAA | Pdi30ORF18320P |
| 18300 | 142 aa hypothetical protein | |||
| 18305 | nucleotidyltransferase | |||
| 18310 | 102 aa hypothetical protein | |||
| 18315 | S | S.CdiS122ORF2565P (100% identity) | TAGNNNNNRTGAA | S.Pdi30ORF18320P |
| 18320 | M | M.CdiS122ORF2565P (100% identity) | TAGNNNNNRTGAA | M.Pdi30ORF18320P |
| 18325 | tagatose-bisphosphate aldolase | |||
| 18825 | 111 aa hypothetical protein | |||
| 18830 | R | CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | Pdi30ORF18845P |
| 18835 | 423 aa hypothetical protein | |||
| 18840 | S | S.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | S.Pdi30ORF18845P |
| 18845 | M | M.CdiEW81II (100% identity) | ATTYNNNNNCTTC | M.Pdi30ORF18845P |
| 18850 | single-stranded DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7735 | 38 aa hypothetical protein | |||
| 7740 | M | M.CdiS0352ORF1355P (100% identity) | M.Pdi30ORF7740P | |
| 7745 | 73 aa hypothetical protein | |||
| 17005 | phospholipase | |||
| 17010 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Pdi30ORF17010P |
| 17015 | Rrf2 family transcriptional regulator | |||
| 18680 | sortase | |||
| 18685 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Pdi30ORF18685P |
| 18690 | 872 aa hypothetical protein | |||
| 18760 | 383 aa hypothetical protein | |||
| ??? | M | M1.CdiS122ORF3010P (100% identity) | CATCG | M1.Pdi30ORF18765P |
| ??? | M | M1.CdiLEM1ORFFP (100% identity) | CATCG | M2.Pdi30ORF18765P |
| 18770 | recombinase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13340 | ATPase AAA | |||
| 13345 | R | CdiS122McrCP (100% identity) | Pdi30McrCP | |
| 13350 | R | CdiS122McrBP (100% identity) | Pdi30McrBP | |
| 13355 | cell division protein | |||