|
Putative Methanosphaerula palustris E1-9c RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 20998
Complete sequence: 2,922,917 bp
GenBank #: CP001338 (NC_011832)
REBASE acronym: MpaE
Org_num: 5278
All begin Mpal_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
899 | 212 aa conserved hypothetical protein | |||
900 | S | S.Mso21ORFIP (35% identity) | S.MpaEORF901P | |
901 | M | M.Mbo6A8ORF1031P (86% identity) | M.MpaEORF901P | |
902 | R | Mbo6A8ORF1031P (84% identity) | MpaEORF901P | |
903 | 36 aa hypothetical protein | |||
1091 | protein of unknown function DUF45 | |||
1092 | R | TspPB12ORF2800P (57% identity) | MpaEORF1097P | |
1093 | restriction endonuclease | |||
??? | S | S.Tsp9NORFGP (34% identity) | S.MpaEORF1097P | |
1096 | 597 aa hypothetical protein | |||
1097 | M | M.MspKEPCO1ORF9160P (67% identity) | M.MpaEORF1097P | |
1098 | 54 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3 | aminotransferase class I and II | |||
4 | M | M.MseS3FaORF4960P (49% identity) | CTNAG | M.MpaEORF4P |
5 | Methyltransferase type 11 | |||
702 | 520 aa hypothetical protein | |||
703 | M | M.MboBA1ORF393P (53% identity) | GATC | M.MpaEORF703P |
704 | SufBD protein | |||
924 | major facilitator superfamily MFS_1 | |||
925 | M | M.MmaDAL1ORF1730P (51% identity) | M.MpaEORF925P | |
926 | 305 aa conserved hypothetical protein | |||
992 | HAD-superfamily hydrolase, subfamily IA, variant | |||
993 | RM | 826 aa hypothetical protein | MpaEORF993P | |
994 | PAS/PAC sensor signal transduction histidine | |||
1366 | 34 aa hypothetical protein | |||
1367 | M | M.Mbo6A8DndBP (62% identity) | M.MpaEDndBP | |
1368 | sulfurtransferase DndC | |||
1367 | DNA sulfur modification protein DndB | |||
1368 | M | M.Mbo6A8DndCP (78% identity) | M.MpaEDndCP | |
1369 | DNA sulfur modification protein DndD | |||
1368 | sulfurtransferase DndC | |||
1369 | M | M.Mbo6A8DndDP (64% identity) | M.MpaEDndDP | |
1370 | DNA sulfur modification protein DndE | |||
1369 | DNA sulfur modification protein DndD | |||
1370 | M | M.Mbo6A8DndEP (77% identity) | M.MpaEDndEP | |
1371 | aminotransferase class V | |||
1370 | DNA sulfur modification protein DndE | |||
1371 | M | M.Mbo6A8DndAP (83% identity) | M.MpaEDndAP | |
1372 | protein of unknown function DUF262 | |||
2730 | amidohydrolase | |||
2731 | M | M.Mbo6A8ORF2206P (60% identity) | GTAC | M.MpaEORF2731P |
2732 | HEAT domain containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
1092 | type I site-specific deoxyribonuclease, HsdR | |||
1093 | R | Ama55MrrP (33% identity) | MpaEMrrP | |
1094 | restriction modification system DNA specificity | |||
1608 | CRISPR-associated helicase Cas3 | |||
1609 | R | Mth2373MrrP (52% identity) | MpaEMrr2P | |
1610 | 49 aa hypothetical protein |