Chloroflexus aggregans DSM 9485 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Chloroflexus aggregans DSM 9485 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 10878
Complete sequence: 4,684,931 bp
GenBank #: CP001337 (NC_011831)
REBASE acronym: Cag
Org_num: 5277
All begin Cagg_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1803 | 65 aa hypothetical protein | |||
| 1804 | M | M.TscK1ORF6860P (79% identity) | M.CagORF1804P | |
| 1805 | S | S.Aba82ORF2380P (55% identity) | S.CagORF1804P | |
| 1806 | 220 aa conserved hypothetical protein | |||
| 1807 | R | UchJFFORF33P (87% identity) | CagORF1804P | |
| 1808 | protein of unknown function DUF45 | |||
| 3292 | transposase | |||
| 3293 | R | Pfi22803ORF2080P (71% identity) | CagORF3300P | |
| 3294 | pseudogene | |||
| 3296 | 297 aa conserved hypothetical protein | |||
| 3297 | S | S.CspYORF1958P (72% identity) | S.CagORF3300P | |
| 3298 | protein of unknown function DUF86 | |||
| 3299 | DNA polymerase beta domain protein region | |||
| 3300 | M | M.CdaTAD1ORF4675P (75% identity) | M.CagORF3300P | |
| 3301 | 81 aa hypothetical protein Caur_2435 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 436 | FAD dependent oxidoreductase | |||
| 437 | R | Cspisl2ORF8405P (86% identity) | GGTNACC | CagORF438P |
| 438 | M | M.Cspisl2ORF8405P (94% identity) | GGTNACC | M.CagORF438P |
| 439 | Serine-type D-Ala-D-Ala carboxypeptidase | |||
| 449 | pseudogene | |||
| 450 | R | UbaMSORFX12P (44% identity) | GGCGCC | CagVIIP |
| 451 | V | V.CspOt14ORF17960P (31% identity) | V.CagVIIP | |
| 452 | M | M.KspCCNU1ORF31255P (49% identity) | GGCGCC | M.CagVII |
| 453 | pseudogene | |||
| 464 | peptidase M23B | |||
| 465 | RM | OtrDG6ORF786P (55% identity) | CagORF465P | |
| 466 | (NiFe) hydrogenase maturation protein HypF | |||
| 675 | pseudogene | |||
| 677 | M | M.Hri593ORF20840P (88% identity) | M.CagX | |
| 678 | 374 aa hypothetical protein Caur_0076 | |||
| 1095 | 176 aa hypothetical protein | |||
| 1097 | R | PmeK22ORF707P (75% identity) | CagORF1098P | |
| 1098 | M | M.PmeK22ORF707P (71% identity) | M.CagORF1098P | |
| 1099 | PAS/PAC sensor signal transduction histidine | |||
| 1118 | 156 aa conserved hypothetical protein | |||
| 1119 | M | M.RmaAA338ORF14030P (73% identity) | M.CagORF1119P | |
| 1120 | 1242 aa conserved hypothetical protein | |||
| 1120 | 1242 aa conserved hypothetical protein | |||
| 1121 | R | Nsp210ORF4935P (47% identity) | ACGCGT | CagVIIIP |
| 1122 | M | M.Bvi690TORFBP (42% identity) | ACGCGT | M.CagVIII |
| 1123 | helicase domain protein | |||
| 1375 | 726 aa hypothetical protein | |||
| 1376 | V | V.ThyAC55ORF287P (32% identity) | V.CagORF1377P | |
| 1377 | M | M.Msa3ORF8680P (43% identity) | M.CagORF1377P | |
| 1378 | Type II site-specific deoxyribonuclease | |||
| 1377 | DNA-cytosine methyltransferase | |||
| 1378 | R | CspMSGORFQP (88% identity) | TTCGAA | CagVP |
| 1379 | M | M.Rca13941ORF1074P (88% identity) | TTCGAA | M.CagV |
| 1380 | glycosyl transferase group 1 | |||
| 2086 | succinyl-CoA synthetase, beta subunit | |||
| 2087 | M | M.CspYORF1261P (85% identity) | GATC | M.CagIV |
| 2088 | 257 aa conserved hypothetical protein | |||
| 2237 | 131 aa hypothetical protein | |||
| 2238 | M | M.Cba7II (90% identity) | TCCGGA | M.CagVI |
| 2239 | R | Cba7IIP (96% identity) | TCCGGA | CagVIP |
| 2240 | DNA methylase N-4/N-6 domain protein | |||
| 2239 | 318 aa conserved hypothetical protein | |||
| 2240 | M | M.Bglgr1ORF4210P (68% identity) | CGTACG | M.CagORF2240P |
| 2241 | R | Psp12ORF1304P (73% identity) | CGTACG | CagORF2240P |
| 2242 | DNA methylase N-4/N-6 domain protein | |||
| 2241 | 283 aa conserved hypothetical protein | |||
| 2242 | M | M.Sli6715ORF11540P (83% identity) | RGATCY | M.CagIII |
| 2243 | R | CthsBORF11955P (65% identity) | RGATCY | CagIIIP |
| 2244 | formyl transferase domain protein | |||
| 2251 | phosphoribosylglycinamide synthetase | |||
| 2252 | M | M.Cspisl2ORF10405P (29% identity) | TTCGAA | M.CagORF2252P |
| 2253 | Radical SAM domain protein | |||
| 2331 | DNA gyrase, A subunit | |||
| 2332 | RM | adenine specific DNA methyltransferase | CagORF2332AP | |
| 2333 | DNA methylase N-4/N-6 domain protein | |||
| 2334 | 257 aa conserved hypothetical protein | |||
| 2335 | RM | Adenine specific DNA methyltransferase | CagORF2332BP | |
| 2336 | YbbR family protein | |||
| 2332 | adenine specific DNA methyltransferase | |||
| 2333 | M | M.Cspisl2ORF3560P (94% identity) | CAGCTG | M.CagORF2333P |
| 2334 | R | Cspisl2ORF3560P (84% identity) | CAGCTG | CagORF2333P |
| 2335 | Adenine specific DNA methyltransferase | |||
| 2449 | phage SPO1 DNA polymerase-related protein | |||
| 2450 | M | M.Cspisl2ORF130P (80% identity) | CATG | M.CagIX |
| 2451 | glycosyl transferase family 2 | |||
| 2591 | helicase domain protein | |||
| 2592 | RM | CspYORF909P (49% identity) | CagORF2592P | |
| 2593 | cyclic nucleotide-binding protein | |||
| 3321 | 197 aa conserved hypothetical protein | |||
| 3322 | RM | VbaB154ORF5705P (62% identity) | CagORF3322P | |
| 3323 | helicase domain protein | |||
| 3336 | pseudogene | |||
| 3337 | M | M.CthsBORF14505P (80% identity) | CAGCTG | M.CagORF3337P |
| 3338 | PBS lyase HEAT domain protein repeat-containing | |||
| 3338 | PBS lyase HEAT domain protein repeat-containing | |||
| 3339 | R | CasB79ORF11635P (65% identity) | GCCNNNNNGGC | CagI |
| 3340 | M | M.CthsBORF14450P (86% identity) | GCCNNNNNGGC | M.CagI |
| 3341 | 136 aa hypothetical protein | |||
| 3342 | 152 aa conserved hypothetical protein | |||
| 3343 | M | M.Rca13941ORF2231P (97% identity) | GANTC | M.CagII |
| 3344 | pyridoxamine 5-phosphate oxidase-related | |||