Escherichia coli K-12 DHB4 |
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Putative Escherichia coli K-12 DHB4 RM systems
Ref: Anton,B.P. et al. unpublished
REBASE ref # 21921
| Sequence length: | GenBank #: | |
| Chromosome: | 4,546,849 bp | CP014270 |
| plasmid F128-(DHB4): | 232,954 bp | CP014271 |
REBASE acronym: EcoDHB4
Org_num: 19014
All begin DHB4_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22270 | 113 aa hypothetical protein | |||
| 22275 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoDHB4I |
| 22280 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoDHB4I |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | EcoDHB4IP |
| 22290 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9860 | drug/metabolite exporter YedA | |||
| 9865 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoDHB4DcmP |
| 9870 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDHB4Dcm |
| 9875 | hydrolase | |||
| 16520 | Fis family transcriptional regulator | |||
| 16525 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoDHB4ORF16525P |
| 16530 | 59 aa hypothetical protein | |||
| 17155 | ribulose phosphate epimerase | |||
| 17160 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDHB4Dam |
| 17165 | cell division protein DamX | |||
| plasmid F128-(DHB4) | ||||
| 23235 | 101 aa hypothetical protein | |||
| 23240 | M | M.SflN92ORF24820P (100% identity) | M.EcoDHB4ORF23240P | |
| 23245 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22255 | 906 aa hypothetical protein | |||
| 22260 | R | Msa17McrC2P (100% identity) | EcoDHB4McrCP | |
| 22265 | R | SenHNK130McrBP (100% identity) | EcoDHB4McrBP | |
| 22270 | 113 aa hypothetical protein | |||
| ??? | type I restriction enzyme EcoKI R protein | |||
| 22290 | R | SenHNK130MrrP (100% identity) | EcoDHB4MrrP | |
| 22295 | GTP-binding protein | |||