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Putative Vibrio mimicus ATCC 33654 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 21329
Sequence length: | GenBank #: | |
chromosome 1: | 1,347,652 bp | CP014042 |
chromosome 2: | 3,091,045 bp | CP014043 |
REBASE acronym: Vmi33654
Org_num: 18097
All begin AL543_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome 2 | ||||
8740 | DUF4357 domain-containing protein | |||
8745 | M | M.Vfu242004ORFCP (94% identity) | GACNNNNNNRTGG | M.Vmi33654I |
8750 | S | S.Vfu242004ORFCP (66% identity) | GACNNNNNNRTGG | S.Vmi33654I |
8755 | anticodon nuclease | |||
8760 | cell filamentation protein Fic | |||
8765 | R | VhaBSW7ORF25470P (99% identity) | GACNNNNNNRTGG | Vmi33654IP |
8770 | site-specific integrase | |||
9320 | IS630 family transposase | |||
9325 | R | AhyRBAHIIIP (44% identity) | Vmi33654ORF9345P | |
9330 | S | S.RsoT82ORF10920P (73% identity) | S.Vmi33654ORF9345P | |
9335 | anticodon nuclease | |||
9340 | 78 aa hypothetical protein | |||
9345 | M | M.Aca52ORF19720P (96% identity) | M.Vmi33654ORF9345P | |
21565 | YecA family protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
215 | 103 aa hypothetical protein | |||
220 | M | M.GagORF3971P (57% identity) | M.Vmi33654ORF220P | |
225 | 496 aa hypothetical protein | |||
2510 | integrase | |||
2515 | M | M.VchHE25ORF1047P (98% identity) | MTCGAK | M.Vmi33654II |
2520 | 251 aa hypothetical protein | |||
2525 | response regulator | |||
2530 | R | Vpa071ORF1321P (80% identity) | Vmi33654IIP | |
2535 | 141 aa hypothetical protein | |||
5210 | DUF3465 domain-containing protein | |||
5215 | M | M.VcoL11ORFFP (100% identity) | M.Vmi33654ORF5215P | |
21160 | 93 aa hypothetical protein | |||
chromosome 2 | ||||
7985 | ribulose-phosphate 3-epimerase | |||
7990 | M | M.Vmi602DamP (99% identity) | GATC | M.Vmi33654Dam |
7995 | cell division protein DamX | |||
13335 | IS630 family transposase | |||
13340 | M | M.SspMA440ORF11575P (33% identity) | M.Vmi33654ORF13340P | |
13345 | helicase |