Desulfovibrio fairfieldensis CCUG 45958 |
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Putative Desulfovibrio fairfieldensis CCUG 45958 RM systems
Ref: Holder,M.E. et al. unpublished
REBASE ref # 20000
Complete sequence: 3,699,310 bp
GenBank #: CP014229
REBASE acronym: Dfa45958
Org_num: 18073
All begin AXF13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3570 | 696 aa hypothetical protein | |||
| 3575 | R | AspDMS1ORF4470P (80% identity) | CCCNNNNNCTTC | Dfa45958IP |
| ??? | S | S.DbaKI (49% identity) | CCCNNNNNCTTC | S.Dfa45958I |
| 3580 | M | M2.GbaNRL1ORF6110P (80% identity) | CCCNNNNNCTTC | M2.Dfa45958I |
| 3585 | M | M1.AspDMS1ORF4470P (78% identity) | CCCNNNNNCTTC | M1.Dfa45958I |
| 3590 | 196 aa hypothetical protein | |||
| 13425 | 169 aa hypothetical protein | |||
| 13430 | R | AfaZD02ORF14150P (78% identity) | CAGNNNNNCTA | Dfa45958IIIP |
| 13435 | S | S.PbaS2ORF14805P (41% identity) | CAGNNNNNCTA | S.Dfa45958III |
| 13440 | anticodon nuclease | |||
| 13445 | M | M.PspGSB1ORF8435P (77% identity) | CAGNNNNNCTA | M.Dfa45958III |
| 13450 | restriction endonuclease | |||
| 15355 | metal-dependent hydrolase | |||
| 15360 | R | restriction endonuclease subunit R | Dfa45958ORF15370P | |
| 15365 | S | S.AmeR126ORFBP (43% identity) | S.Dfa45958ORF15370P | |
| 15370 | M | M.Lci12438III (56% identity) | M.Dfa45958ORF15370P | |
| 15375 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4645 | 171 aa hypothetical protein | |||
| 4650 | M | M1.DspX2ORF2603P (72% identity) | M1.Dfa45958ORF4650P | |
| 4655 | M | M.Dfa45958ORF8115P (78% identity) | M2.Dfa45958ORF4650P | |
| 4660 | 286 aa hypothetical protein | |||
| 6585 | 61 aa hypothetical protein | |||
| 6590 | M | M.DdiDORF2485P (75% identity) | M.Dfa45958ORF6590P | |
| 6595 | 114 aa hypothetical protein | |||
| 7745 | 174 aa hypothetical protein | |||
| 7750 | M | M.PaeAs2ORF430P (54% identity) | M.Dfa45958ORF7750P | |
| 7755 | 229 aa hypothetical protein | |||
| 7940 | 247 aa hypothetical protein | |||
| 7945 | M | M.Tni5205ORFQP (41% identity) | M.Dfa45958ORF7945P | |
| 7950 | 107 aa hypothetical protein | |||
| 8005 | 78 aa hypothetical protein | |||
| 8010 | M | M1.Dpi32187ORFFP (41% identity) | M.Dfa45958ORF8010P | |
| 8015 | 140 aa hypothetical protein | |||
| 8040 | 233 aa hypothetical protein | |||
| 8045 | M | M2.Dpi32187ORFFP (59% identity) | M.Dfa45958ORF8045P | |
| 8050 | 163 aa hypothetical protein | |||
| 8090 | 433 aa hypothetical protein | |||
| 8095 | M | M.PpoCR1ORF6315P (40% identity) | CCCGGG | M.Dfa45958ORF8095P |
| 8100 | 331 aa hypothetical protein | |||
| 8110 | 202 aa hypothetical protein | |||
| 8115 | M | M2.Dfa45958ORF4650P (78% identity) | M.Dfa45958ORF8115P | |
| 8120 | 71 aa hypothetical protein | |||
| 8355 | 132 aa hypothetical protein | |||
| ??? | M | M.MvaF222ORF8865P (33% identity) | CTGCAG | M.Dfa45958II |
| ??? | R | 361 aa hypothetical protein | CTGCAG | Dfa45958IIP |
| 8360 | 323 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3565 | 338 aa hypothetical protein | |||
| 3570 | R | Kox325GmrSDP (59% identity) | Dfa45958GmrDP | |
| 3575 | DEAD/DEAH box helicase | |||
| 13445 | type I restriction endonuclease subunit M | |||
| 13450 | R | Hsp1423MrrP (55% identity) | Dfa45958MrrP | |
| 13460 | 356 aa hypothetical protein | |||