Shewanella baltica OS223 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Shewanella baltica OS223 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 10850
| Sequence length: | GenBank #: | |
| Chromosome: | 5,145,902 bp | CP001252 (NC_011663) |
| plasmid pS22301: | 88,311 bp | CP001253 (NC_011664) |
| plasmid pS22302: | 65,448 bp | CP001254 (NC_011668) |
REBASE acronym: Sba223
Org_num: 5252
All begin Sbal223_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 387 | XRE family transcriptional regulator | |||
| 388 | R | Afe6S08ORF4395P (78% identity) | Sba223ORF389P | |
| 389 | M | M.Pspp712ORF11875P (76% identity) | M.Sba223ORF389P | |
| 390 | S | S.SspAg2ORF4615P (64% identity) | S.Sba223ORF389P | |
| 391 | 571 aa conserved hypothetical protein | |||
| 3469 | DUF3368 domain-containing protein | |||
| 3470 | M | M.Sba117ORF4744P (96% identity) | M.Sba223ORF3470P | |
| 3471 | S | S2.SbaFHM2ORF4100P (64% identity) | S.Sba223ORF3470P | |
| 3472 | filamentation induced by cAMP protein Fic | |||
| 3473 | R | Vsp1105ORF3940P (99% identity) | Sba223ORF3470P | |
| 3474 | GCN5-related N-acetyltransferase | |||
| 4187 | 410 aa conserved hypothetical protein | |||
| 4188 | M | M.Spu4MORF19400P (95% identity) | M.Sba223ORF4188P | |
| 4189 | S | S.VspER1AORF13940P (47% identity) | S.Sba223ORF4188P | |
| 4190 | R | Spu10695IP (95% identity) | Sba223ORF4188P | |
| 4192 | transposase IS3/IS911 family protein | |||
| plasmid pS22302 | ||||
| 4453 | 380 aa conserved hypothetical protein | |||
| 4454 | S | S.Vch93ORF3152P (60% identity) | S.Sba223ORF4455P | |
| 4455 | M | M.Pte172twORF19435P (97% identity) | M.Sba223ORF4455P | |
| 4456 | 616 aa conserved hypothetical protein | |||
| 4457 | R | Vfl5335ORF29000P (96% identity) | Sba223ORF4455P | |
| 4458 | transcriptional regulator, XRE family | |||
| 4469 | addiction module toxin, RelE/StbE family | |||
| 4470 | R | Sco39565ORFAP (95% identity) | Sba223ORF4473P | |
| 4471 | 382 aa conserved hypothetical protein | |||
| 4472 | S | S.VdiT2ORF24840P (52% identity) | S.Sba223ORF4473P | |
| 4473 | M | M.Vcr106ORF19665P (96% identity) | M.Sba223ORF4473P | |
| 4474 | integrase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2639 | 124 aa conserved hypothetical protein | |||
| 2640 | M | DNA N-6-adenine-methyltransferase | M.Sba223ORF2640P | |
| 2641 | 94 aa conserved hypothetical protein | |||
| 2641 | 94 aa conserved hypothetical protein | |||
| 2642 | M | M2.SspW3ORF2522P (93% identity) | M.Sba223ORF2642P | |
| 2643 | 75 aa conserved hypothetical protein | |||
| 3999 | 61 aa conserved hypothetical protein | |||
| 4000 | M | M.Ssp305ORF570P (100% identity) | GATC | M.Sba223ORF4000P |
| 4001 | Sporulation domain protein | |||
| plasmid pS22301 | ||||
| 4394 | 274 aa hypothetical protein | |||
| ??? | RM | N-6 DNA methylase | Sba223ORF4395AP | |
| 4396 | transposase IS4 family protein | |||
| ??? | RM | SdeOSI (79% identity) | Sba223ORF4395BP | |
| 4397 | S | S.SdeOSI (60% identity) | S.Sba223ORF4395P | |
| 4398 | integrase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 369 | filamentation induced by cAMP protein Fic | |||
| 370 | R | Sba185ORF360P (98% identity) | Sba223ORF370P | |
| 371 | transcriptional regulator, LysR family | |||
| 3604 | 81 aa conserved hypothetical protein | |||
| ??? | R | SbaOSMrrP (56% identity) | Sba223MrrAP | |
| 3606 | transposase IS4 family protein | |||
| ??? | R | SbaOSMrrP (44% identity) | Sba223MrrBP | |
| 3607 | diguanylate cyclase | |||