Bradyrhizobium species CCGE-LA001 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bradyrhizobium species CCGE-LA001 RM systems
Ref: Servin-Garciduenas,L.E. et al. Mol. Phylogenet. Evol. 79, 1-11 (2014)
REBASE ref # 21598
Complete sequence: 7,833,499 bp
GenBank #: CP013949
REBASE acronym: BspLA1
Org_num: 17956
All begin BCCGELA001_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 33225 | ABC transporter | |||
| 33230 | S | S.PstRCH2I (44% identity) | GAANNNNNNCTCC | S.BspLA1I |
| 33235 | M | M.Spu6515ORFBP (82% identity) | GAANNNNNNCTCC | M.BspLA1I |
| 33240 | R | AviAEORF4140P (88% identity) | GAANNNNNNCTCC | BspLA1IP |
| 33245 | 313 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 27215 | metalloprotease | |||
| 27220 | M | M.BspS1MBORF1795P (98% identity) | GANTC | M.BspLA1II |
| 27225 | 108 aa hypothetical protein | |||
| 30235 | 91 aa hypothetical protein | |||
| 30240 | RM | BspRAC05ORF4986P (24% identity) | BspLA1ORF30240P | |
| 30245 | 746 aa hypothetical protein | |||
| 30285 | 66 aa hypothetical protein | |||
| 30290 | M | M.BdiXF15ORF58910P (77% identity) | M.BspLA1ORF30290P | |
| 30295 | 129 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 33240 | restriction endonuclease subunit R | |||
| 33245 | R | BspA11MrrP (83% identity) | BspLA1MrrP | |
| 33255 | 2-deoxy-D-gluconate 3-dehydrogenase | |||