Escherichia coli JJ1897 |
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Putative Escherichia coli JJ1897 RM systems
Ref: Johnson,T.J. et al. unpublished
REBASE ref # 21218
| Sequence length: | GenBank #: | |
| Chromosome: | 5,174,541 bp | CP013837 |
| plasmid pJJ1897_1: | 140,502 bp | CP013836 |
REBASE acronym: Eco1897
Org_num: 17932
All begin AVR73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24860 | 165 aa hypothetical protein | |||
| 24865 | R | EcoW004ORF18655P (100% identity) | Eco1897ORF24880P | |
| 24870 | 397 aa hypothetical protein | |||
| 24875 | S | S.EcoW004ORF18655P (100% identity) | S.Eco1897ORF24880P | |
| 24880 | M | M.EcoW004ORF18655P (100% identity) | M.Eco1897ORF24880P | |
| 24885 | molecular chaperone Tir | |||
| 25230 | 237 aa hypothetical protein | |||
| 25235 | R | EcoNQ3ORF21185P (100% identity) | Eco1897ORF25245P | |
| 25240 | S | S.EcoZ247ORF19790P (97% identity) | S.Eco1897ORF25245P | |
| 25245 | M | M.EcoZ247ORF19790P (100% identity) | M.Eco1897ORF25245P | |
| 25250 | 699 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1510 | pseudogene | |||
| 1515 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco1897ORF1515P |
| 1520 | 568 aa hypothetical protein | |||
| 5330 | 71 aa hypothetical protein | |||
| 5335 | M | M.KpnYN1ORFGP (89% identity) | M.Eco1897ORF5335P | |
| 5340 | DNA-binding protein | |||
| 8180 | TrmB family transcriptional regulator | |||
| 8185 | M | M.EcosS9ORF10680P (100% identity) | M.Eco1897ORF8185P | |
| 8200 | 108 aa hypothetical protein | |||
| 11775 | multidrug DMT transporter | |||
| 11780 | V | V.SflC32DcmP (74% identity) | V.Eco1897DcmP | |
| 11785 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco1897DcmP |
| 11790 | hydrolase | |||
| 19300 | Fis family transcriptional regulator | |||
| 19305 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1897ORF19305P |
| 19310 | 59 aa hypothetical protein | |||
| 19910 | ribulose phosphate epimerase | |||
| 19915 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1897DamP |
| 19920 | cell division protein DamX | |||
| 25495 | pseudogene | |||
| 25500 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco1897ORF25500P |
| 25505 | LexA family transcriptional regulator | |||
| 25535 | 67 aa hypothetical protein | |||
| 25540 | M | M.Ecos142ORF20090P (100% identity) | M.Eco1897ORF25540P | |
| 25545 | holin | |||
| plasmid pJJ1897_1 | ||||
| 26175 | 73 aa hypothetical protein | |||
| 26180 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco1897ORF26180P | |
| 26185 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25245 | restriction endonuclease subunit M | |||
| 25250 | R | EcoW004GmrDP (100% identity) | Eco1897GmrDP | |
| 25255 | cell filamentation protein Fic | |||