Escherichia coli JJ2434 |
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Putative Escherichia coli JJ2434 RM systems
Ref: Johnson,T.J. et al. unpublished
REBASE ref # 21218
| Sequence length: | GenBank #: | |
| Chromosome: | 5,128,614 bp | CP013835 |
| plasmid pJJ2434_1: | 126,302 bp | CP013833 |
| plasmid pJJ2434_2: | 62,183 bp | CP013834 |
REBASE acronym: Eco2434
Org_num: 17931
All begin AVR68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1510 | 156 aa hypothetical protein | |||
| 1515 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco2434ORF1520P |
| 1520 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco2434ORF1520P |
| 1525 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco2434ORF1520P |
| 1530 | 267 aa hypothetical protein | |||
| 19975 | 400 aa hypothetical protein | |||
| 19980 | M | M.Sma1978ORFBP (100% identity) | M.Eco2434ORF19980P | |
| 19985 | anticodon nuclease | |||
| 19990 | S | S.Sma1978ORFBP (100% identity) | S.Eco2434ORF19980P | |
| 19995 | ATP-dependent DNA helicase RecG | |||
| 20000 | histidinol-phosphatase | |||
| 20005 | R | Sma1978ORFBP (100% identity) | Eco2434ORF19980P | |
| 20010 | DNA-binding protein | |||
| 25350 | 112 aa hypothetical protein | |||
| 25355 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | Eco2434ORF25365P |
| 25360 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.Eco2434ORF25365P |
| 25365 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.Eco2434ORF25365P |
| 25370 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5045 | 71 aa hypothetical protein | |||
| 5050 | M | M.KpnYN1ORFGP (89% identity) | M.Eco2434ORF5050P | |
| 5055 | DNA-binding protein | |||
| 7375 | TrmB family transcriptional regulator | |||
| 7380 | M | M.EcosS9ORF10680P (100% identity) | M.Eco2434ORF7380P | |
| 7395 | 108 aa hypothetical protein | |||
| 10975 | multidrug DMT transporter | |||
| 10980 | V | V.SflC32DcmP (74% identity) | V.Eco2434DcmP | |
| 10985 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco2434DcmP |
| 10990 | hydrolase | |||
| 18815 | Fis family transcriptional regulator | |||
| 18820 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco2434ORF18820P |
| 18825 | 59 aa hypothetical protein | |||
| 19425 | ribulose phosphate epimerase | |||
| 19430 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2434DamP |
| 19435 | cell division protein DamX | |||
| 24985 | transposase | |||
| 24990 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco2434ORF24990P |
| 24995 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco2434ORF24990P |
| 25000 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco2434ORF24990P |
| 25005 | restriction endonuclease | |||
| plasmid pJJ2434_1 | ||||
| 25725 | 308 aa hypothetical protein | |||
| 25730 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco2434ORF25730P | |
| 25735 | 73 aa hypothetical protein | |||
| plasmid pJJ2434_2 | ||||
| 26570 | 73 aa hypothetical protein | |||
| 26575 | M | M.Sfl7ORF23565P (100% identity) | M.Eco2434ORF26575P | |
| 26580 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25000 | restriction endonuclease | |||
| 25005 | R | EcosS9McrCP (100% identity) | Eco2434McrCP | |
| 25010 | restriction endonuclease | |||