Escherichia coli CD306 |
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Putative Escherichia coli CD306 RM systems
Ref: Johnson,T.J. et al. unpublished
REBASE ref # 21218
| Sequence length: | GenBank #: | |
| Chromosome: | 5,073,822 bp | CP013831 |
| plasmid pCD306: | 145,221 bp | CP013832 |
REBASE acronym: Eco306
Org_num: 17930
All begin AVR67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1510 | 156 aa hypothetical protein | |||
| 1515 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco306ORF1520P |
| 1520 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco306ORF1520P |
| 1525 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco306ORF1520P |
| 1530 | 267 aa hypothetical protein | |||
| 25065 | 112 aa hypothetical protein | |||
| 25070 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | Eco306ORF25080P |
| 25075 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.Eco306ORF25080P |
| 25080 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.Eco306ORF25080P |
| 25085 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2680 | 71 aa hypothetical protein | |||
| 2685 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco306ORF2685P | |
| 2690 | XRE family transcriptional regulator | |||
| 5535 | 71 aa hypothetical protein | |||
| 5540 | M | M.KpnYN1ORFGP (89% identity) | M.Eco306ORF5540P | |
| 5545 | DNA-binding protein | |||
| 7900 | TrmB family transcriptional regulator | |||
| 7905 | M | M.EcosS9ORF10680P (100% identity) | M.Eco306ORF7905P | |
| 7920 | 108 aa hypothetical protein | |||
| 11490 | multidrug DMT transporter | |||
| 11495 | V | V.SflC32DcmP (74% identity) | V.Eco306DcmP | |
| 11500 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco306DcmP |
| 11505 | hydrolase | |||
| 18790 | Fis family transcriptional regulator | |||
| 18795 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco306ORF18795P |
| 18800 | 59 aa hypothetical protein | |||
| 19400 | ribulose phosphate epimerase | |||
| 19405 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco306DamP |
| 19410 | cell division protein DamX | |||
| 24700 | transposase | |||
| 24705 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco306ORF24705P |
| 24710 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco306ORF24705P |
| 24715 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco306ORF24705P |
| 24720 | restriction endonuclease | |||
| plasmid pCD306 | ||||
| 26165 | 73 aa hypothetical protein | |||
| 26170 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco306ORF26170P | |
| 26175 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24715 | restriction endonuclease | |||
| 24720 | R | EcosS9McrCP (100% identity) | Eco306McrCP | |
| 24725 | restriction endonuclease | |||