Escherichia coli ST648 |
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Putative Escherichia coli ST648 RM systems
Ref: Gao,Z. unpublished
REBASE ref # 21181
| Sequence length: | GenBank #: | |
| Chromosome: | 5,056,598 bp | CP008697 |
| plasmid pEC648_1: | 120,653 bp | CP008715 |
REBASE acronym: Eco648
Org_num: 17813
All begin FH07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14440 | metal-dependent hydrolase | |||
| 14445 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco648ORF14465P |
| 14450 | 594 aa hypothetical protein | |||
| 14455 | 227 aa hypothetical protein | |||
| 14460 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco648ORF14465P |
| 14465 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco648ORF14465P |
| 14475 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2560 | 160 aa hypothetical protein | |||
| 2565 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.Eco648ORF2565P |
| 2570 | LexA family transcriptional regulator | |||
| 11320 | 65 aa hypothetical protein | |||
| 11325 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco648ORF11325P |
| 11340 | 92 aa hypothetical protein | |||
| 14730 | multidrug DMT transporter | |||
| 14735 | V | V.EcosEC7DcmP (100% identity) | V.Eco648DcmP | |
| 14740 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco648DcmP |
| 14745 | hydrolase | |||
| 22250 | Fis family transcriptional regulator | |||
| 22255 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco648ORF22255P |
| 22260 | 59 aa hypothetical protein | |||
| 22970 | ribulose-phosphate 3-epimerase | |||
| 22975 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco648DamP |
| 22980 | cell division protein DamX | |||
| plasmid pEC648_1 | ||||
| 50 | 73 aa hypothetical protein | |||
| 55 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco648ORF55P | |
| 60 | 308 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4310 | ATP-dependent helicase | |||
| ??? | M | M.SflN116ORF19490P (99% identity) | M.Eco648ORF4320P | |
| 4325 | R | SflN116ORF19490P (100% identity) | Eco648ORF4320P | |
| 4330 | 100 aa hypothetical protein | |||