Vibrio owensii SH14 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio owensii SH14 RM systems
Ref: Liu,L. et al. unpublished
REBASE ref # 21163
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,689,702 bp | CP045859 |
| chromosome 2: | 2,430,445 bp | CP045860 |
| plasmid pVHvo: | 69,148 bp | CP045861 |
REBASE acronym: VowSH14
Org_num: 17742
All begin APZ19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 16165 | DUF2188 domain-containing protein | |||
| 16170 | M | M.Ama615ORF21255P (97% identity) | GCAGNNNNNAAT | M.VowSH14ORF16170P |
| 16175 | DNA damage-inducible protein D | |||
| 16180 | DNA-damage-inducible protein D | |||
| 16185 | S | S.Vpas10329ORF3030P (96% identity) | GCAGNNNNNAAT | S.VowSH14ORF16170P |
| 16190 | R | Cch9127ORFDP (98% identity) | GCAGNNNNNAAT | VowSH14ORF16170P |
| 16195 | DUF45 domain-containing protein | |||
| 16650 | 182 aa hypothetical protein | |||
| 16655 | S | S.VpaS2ORFHP (100% identity) | S.VowSH14ORF16660P | |
| 16660 | M | M.VpaS2ORFHP (100% identity) | M.VowSH14ORF16660P | |
| 16665 | R | Vow302ORF16910P (100% identity) | VowSH14ORF16660P | |
| 16670 | 80 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1735 | AAA family ATPase | |||
| 1740 | M | M.Vow302DamP (100% identity) | GATC | M.VowSH14DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 9210 | 781 aa hypothetical protein | |||
| 9215 | M | M.Vow302ORF27585P (100% identity) | M.VowSH14ORF9215P | |
| 9220 | 85 aa hypothetical protein | |||
| chromosome 2 | ||||
| 18930 | 147 aa hypothetical protein | |||
| 18935 | M | M.Vow302ORF21910P (100% identity) | M.VowSH14ORF18935P | |
| 18940 | 141 aa hypothetical protein | |||
| 27200 | 759 aa hypothetical protein | |||
| 27205 | M | M.VpaVP17ORF10800P (100% identity) | M.VowSH14ORF27205P | |
| 27210 | 90 aa hypothetical protein | |||
| plasmid pVHvo | ||||
| 28545 | IS5 family transposase | |||
| 28550 | M | M.VpaVP17ORF25320P (100% identity) | M.VowSH14ORF28550P | |
| 28555 | 366 aa hypothetical protein | |||