Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 RM systems
Ref: Thomson,N.R. et al. Genome Res. 18 (10), 1624-1637 (2008)
REBASE ref # 10750
Complete sequence: 4,685,848 bp
GenBank #: AM933172 (NC_011294)
REBASE acronym: SenE
Org_num: 5159
All begin SEN
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4283 | 306 aa conserved hypothetical protein | |||
| 4284 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenEORF4286P |
| 4285 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenEORF4286P |
| 4286 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.SenEORF4286P |
| 4287 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1017 | 231 aa conserved hypothetical protein | |||
| 1018 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenEORF1018P |
| 1019 | V | V.StyUK1DcmP (100% identity) | V.SenEORF1018P | |
| 1020 | membrane protein | |||
| 1949 | crossover junction endodeoxyribonuclease rusa | |||
| 1950 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.SenEORF1950P |
| 1951 | phage protein | |||
| 3219 | Fis DNA-binding protein | |||
| 3220 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenEORF3220P |
| 3221 | exported protein | |||
| 3309 | ribulose-phosphate 3-epimerase | |||
| 3310 | M | M.StyTDamP (100% identity) | GATC | M.SenEDamP |
| 3311 | DamX protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 339 | metabolite transport protein | |||
| 340 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.SenEORF340P |
| 341 | R | SenSL913ORF3124P (100% identity) | CAGAG | SenEORF340P |
| 342 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4286 | Type I restriction-modification system | |||
| ??? | R | SenSA617MrrP (100% identity) | SenEMrr2P | |
| 4290 | Type I restriction-modification system | |||