Tenacibaculum dicentrarchi AY7486TD |
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Putative Tenacibaculum dicentrarchi AY7486TD RM systems
Ref: Grothusen,H. et al. unpublished
REBASE ref # 21380
Complete sequence: 2,918,253 bp
GenBank #: CP013671
REBASE acronym: TdiTD
Org_num: 17687
All begin AUW17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5195 | 543 aa hypothetical protein | |||
| 5200 | S | S.Nsp0038I (45% identity) | S.TdiTDORF5205P | |
| 5205 | M | M.TfiFM3FORF5535P (98% identity) | M.TdiTDORF5205P | |
| 5210 | R | TfiFM3FORF5535P (99% identity) | TdiTDORF5205P | |
| 5215 | 261 aa hypothetical protein | |||
| 5450 | 392 aa hypothetical protein | |||
| 5455 | R | Tdi3141ORF8790P (59% identity) | TdiTDORF5475P | |
| 5460 | 1383 aa hypothetical protein | |||
| 5465 | S | S.LspA80ORF1205P (58% identity) | S.TdiTDORF5475P | |
| 5470 | 329 aa hypothetical protein | |||
| 5475 | M | M.Tdi3141ORF8790P (98% identity) | M.TdiTDORF5475P | |
| 5480 | tRNA modification GTPase MnmE | |||
| 8910 | 178 aa hypothetical protein | |||
| 8915 | R | Nsp3355ORF1599P (88% identity) | TdiTDORF8930P | |
| 8920 | S | S.Nsp3355ORF1599P (56% identity) | S.TdiTDORF8930P | |
| 8925 | cell filamentation protein Fic | |||
| 8930 | M | M.Psp391ORF1630P (89% identity) | M.TdiTDORF8930P | |
| 8935 | molecular chaperone DnaK | |||
| 10000 | metal-dependent hydrolase | |||
| 10005 | R | PspMSW6ORF7935P (73% identity) | TdiTDORF10025P | |
| 10010 | 180 aa hypothetical protein | |||
| 10015 | RlfA protein | |||
| 10020 | S | S.EspG4122ORF12420P (36% identity) | S.TdiTDORF10025P | |
| 10025 | M | M.LspA80ORF13005P (77% identity) | M.TdiTDORF10025P | |
| 10035 | 360 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2895 | 232 aa hypothetical protein | |||
| 2900 | M | M.Tsp2881AORF8185P (76% identity) | M.TdiTDORF2900P | |
| 2905 | thymidylate synthase | |||
| 6390 | 16S rRNA (guanine(966)-N(2))-methyltransferase | |||
| 6395 | RM | Tdi3141ORF5640P (89% identity) | TdiTDORF6395P | |
| 6400 | ABC transporter ATP-binding protein | |||
| 7625 | 164 aa hypothetical protein | |||
| 7630 | M | M.FpsR7ORF360P (75% identity) | GGATG | M1.TdiTDORF7630P |
| 7635 | M | M2.Ran416ORF7780P (77% identity) | GGATG | M2.TdiTDORF7630P |
| 7640 | R | RanYb2ORF9550P (80% identity) | GGATG | TdiTDORF7630P |
| 7645 | DNA cytosine methyltransferase | |||
| 7640 | 461 aa hypothetical protein | |||
| 7645 | M | M.Pli11ORF13540P (71% identity) | GCNGC | M.TdiTDORF7645P |
| 7650 | R | PspF4M1ORF10725P (84% identity) | GCNGC | TdiTDORF7645P |
| 7655 | restriction endonuclease | |||
| 7650 | restriction endonuclease | |||
| 7655 | R | Fli6794ORF1820P (87% identity) | GGNCC | TdiTDORF7660P |
| 7660 | M | M.TfiFM3FORF7725P (95% identity) | GGNCC | M.TdiTDORF7660P |
| 7665 | 324 aa hypothetical protein | |||
| 7665 | 324 aa hypothetical protein | |||
| 7670 | R | Mwh3033IP (69% identity) | GTTAAC | TdiTDORF7675P |
| 7675 | M | M.Cta51KORFAP (63% identity) | GTTAAC | M.TdiTDORF7675P |
| 7680 | 197 aa hypothetical protein | |||
| 7700 | 80 aa hypothetical protein | |||
| 7705 | C | C.FpsVQ50ORF4080P (72% identity) | C.TdiTDORF7710P | |
| 7710 | M | M.Asp426ORF60260P (78% identity) | CGCG | M.TdiTDORF7710P |
| 7715 | R | FpsVQ50ORF4080P (64% identity) | CGCG | TdiTDORF7710P |
| 7720 | group II intron reverse transcriptase/maturase | |||
| 8195 | site-specific recombinase | |||
| 8200 | RM | TfiFM3FORF8780P (95% identity) | TdiTDORF8200P | |
| 8205 | S | S.TfiFM3FORF8780P (56% identity) | S.TdiTDORF8200P | |
| 8210 | 122 aa hypothetical protein | |||
| 9880 | alkaline phosphatase | |||
| 9885 | RM | TfiFM3FORF10585P (63% identity) | TdiTDORF9885P | |
| 9905 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5185 | sulfate transporter | |||
| 5190 | R | TfiFM3FMcrCP (98% identity) | TdiTDMcrCP | |
| 5195 | R | TfiFM3FMcrBP (50% identity) | TdiTDMcrBP | |
| 5200 | 415 aa hypothetical protein | |||
| 12155 | DNA mismatch repair protein MutT | |||
| 12160 | R | TfiFM3FORF12885P (99% identity) | TdiTDORF12160P | |
| 12165 | RNA helicase | |||