Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 |
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Putative Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 RM systems
Ref: Holt,K.E. et al. unpublished
REBASE ref # 10739
Complete sequence: 4,581,797 bp
GenBank #: FM200053 (NC_011147)
REBASE acronym: SenAKU
Org_num: 5149
All begin SSPA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4033 | 131 aa conserved hypothetical protein | |||
| 4034 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.SenAKUORF4035P |
| 4035 | M | M.SptAIII (100% identity) | GAANNNNNNNNTCGC | M.SenAKUORF4035P |
| 4036 | R | SptAIIIP (100% identity) | GAANNNNNNNNTCGC | SenAKUORF4035P |
| 4037 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 817 | 231 aa conserved hypothetical protein | |||
| 818 | M | M.SptADcm (100% identity) | CCWGG | M.SenAKUORF818P |
| 819 | V | V.StyUK1DcmP (100% identity) | V.SenAKUORF818P | |
| 820 | membrane protein | |||
| 2413 | 800 aa conserved hypothetical protein | |||
| 2414 | M | M.StyTORF4329P (100% identity) | GATC | M.SenAKUORF2414P |
| 2415 | exonuclease | |||
| 2444 | phage gene | |||
| 2445 | M | M.SptAORF2624P (100% identity) | GATC | M.SenAKUORF2445P |
| 2446 | phage gene | |||
| 3038 | Fis DNA-binding protein | |||
| ??? | M | M.SptAORF3253P (100% identity) | ATGCAT | M.SenAKUORF3039P |
| 3039 | periplasmic protein | |||
| 3124 | ribulose-phosphate 3-epimerase | |||
| 3125 | M | M.SptADamP (100% identity) | GATC | M.SenAKUDamP |
| 3126 | DamX protein | |||
| 3984 | integrase | |||
| 3985 | M | M.SptAI (100% identity) | CAGCTG | M.SenAKUORF3985P |
| 3986 | C | C.SptAI (100% identity) | C.SenAKUORF3985P | |
| 3987 | R | SptAIP (100% identity) | CAGCTG | SenAKUORF3985P |
| 3988 | 188 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2205 | 33 aa hypothetical protein | |||
| 2206 | R | SptAIIP (100% identity) | CAGAG | SenAKUORF2207P |
| 2207 | M | M.SptAII (100% identity) | CAGAG | M.SenAKUORF2207P |
| 2208 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4036 | subunit R of type I restriction-modification | |||
| 4037 | R | SptAMrrP (100% identity) | SenAKUMrrP | |
| 4038 | 95 aa hypothetical protein | |||