Paucibacter species KCTC 42545 |
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Putative Paucibacter species KCTC 42545 RM systems
Ref: Kim,S.-G. and Lee,Y.-J. unpublished
REBASE ref # 21067
Complete sequence: 5,169,161 bp
GenBank #: CP013692
REBASE acronym: Psp42545
Org_num: 17665
All begin AT984_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12810 | pseudogene | |||
| 12815 | R | ApaB6ORFCP (82% identity) | GTAYNNNNNTGGC | Psp42545IP |
| 12820 | addiction module protein | |||
| 12825 | DNA helicase | |||
| 12830 | S | S.PstMN1ORF22460P (48% identity) | GTAYNNNNNTGGC | S.Psp42545I |
| 12835 | M | M.Pva22033ORF2457P (84% identity) | GTAYNNNNNTGGC | M.Psp42545I |
| 12840 | 270 aa hypothetical protein | |||
| 13080 | 212 aa hypothetical protein | |||
| 13085 | M | M.Sma133ORF19470P (61% identity) | M.Psp42545ORF13085P | |
| 13090 | S | 156 aa hypothetical protein | S.Psp42545ORF13085P | |
| 13095 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5775 | RNA polymerase subunit sigma | |||
| 5780 | M | M2.RmaB10ORF3945P (92% identity) | M.Psp42545ORF5780P | |
| 5785 | DNA methylase N-4 | |||
| 5780 | DNA methylase N-4 | |||
| 5785 | M | M2.SplGro7ORF20490P (96% identity) | M.Psp42545ORF5785P | |
| 5790 | 122 aa hypothetical protein | |||
| 5980 | helicase | |||
| 5985 | M | M.PstSDMORFCP (86% identity) | M.Psp42545ORF5985P | |
| 5990 | ATPase | |||
| 9690 | 81 aa hypothetical protein | |||
| 9695 | M | M.RsoCQPS1ORF12200P (80% identity) | M.Psp42545ORF9695P | |
| 9700 | 120 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9750 | 168 aa hypothetical protein | |||
| 9755 | R | DsuPSORF3354P (92% identity) | GAAATC | Psp42545IIP |
| 9760 | M | M.RsoEP1ORF5715P (91% identity) | GAAATC | M.Psp42545II |
| 9765 | recombination factor protein RarA | |||