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Putative Phytoplasma australiense RM systems
Ref: Tran-Nguyen,L.T. et al. J. Bacteriol. 190 (11), 3979-3991 (2008)
REBASE ref # 10734
Complete sequence: 879,959 bp
GenBank #: AM422018 (NC_010544)
REBASE acronym: PauRPA
Org_num: 5143
All begin PA
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
292 | 201 aa Conserved hypothetical protein | |||
293 | S | Type I restriction-modification enzyme | S.PauRPAORF294P | |
294 | M | M.Pzi2018ORFBP (18% identity) | M.PauRPAORF294AP | |
295 | Retron-type reverse transcriptase,fragment 2 | |||
296 | Retron-type reverse transcriptase,fragment 1 | |||
297 | M | M.Pzi2018ORFBP (30% identity) | M.PauRPAORF294BP | |
298 | 95 aa Conserved hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2 | DNA polymerase III beta subunit | |||
??? | M | M.PauSLYORF5P (95% identity) | M.PauRPAORF3P | |
5 | 334 aa hypothetical protein | |||
249 | 183 aa hypothetical protein | |||
250 | M | M.PauSLYORF218P (97% identity) | GATC | M.PauRPADamP |
251 | 81 aa Conserved hypothetical protein | |||
252 | Uncharacterized phage-associated protein | |||
253 | M | M.SspSV19ORF355P (34% identity) | TCNNGA | M.PauRPAORF253P |
254 | phage-related protein (endonuclease), | |||
290 | phage integrase, fragment | |||
291 | M | M.PauRPAORF789P (87% identity) | TCNNGA | M.PauRPAORF291P |
292 | 201 aa Conserved hypothetical protein | |||
351 | phage integrase | |||
??? | M | M.PauRPAORF789P (98% identity) | TCNNGA | M.PauRPAORF352P |
354 | 201 aa Conserved hypothetical protein | |||
354 | 201 aa Conserved hypothetical protein | |||
355 | S | Type I restriction-modification enzyme | S.PauRPAORF355P | |
356 | 195 aa hypothetical protein | |||
437 | IMP dehydrogenase/GMP reductase, | |||
438 | RM | CklJZZORF17835P (9% identity) | PauRPAORF438P | |
439 | S | 152 aa hypothetical protein | S.PauRPAORF438P | |
440 | Transposase, fragment | |||
620 | phage integrase | |||
621 | M | M.PauRPAORF789P (51% identity) | TCNNGA | M.PauRPAORF621P |
622 | Retron-type reverse transcriptase, fragment | |||
788 | phage integrase | |||
789 | M | M.PauRPAORF352P (98% identity) | TCNNGA | M.PauRPAORF789P |
790 | DNA-directed RNA polymerase specialized sigma |