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Putative Alteromonas macleodii Deep ecotype RM systems
Ref: Ivars-Martinez,E. et al. ISME J (2008) In press
REBASE ref # 28775
Complete sequence: 4,480,937 bp
GenBank #: CP001103 (NC_011138)
REBASE acronym: AmaD
Org_num: 5129
All begin MADE_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1016835 | 276 aa hypothetical protein | |||
1016840 | R | Asp3u76ORF16195P (98% identity) | AmaDORF6850P | |
??? | S | S.PspHLS6ORF3735P (39% identity) | S.AmaDORF6850P | |
1016850 | M | M.Asp3u76ORF16195P (97% identity) | M.AmaDORF6850P | |
1016855 | pirin | |||
1020335 | 263 aa hypothetical protein | |||
1020340 | M | M.AspG152ORFAP (100% identity) | M.AmaDORF4061P | |
1020345 | R | AspG152ORFAP (100% identity) | AmaDORF4061P | |
1020350 | transcriptional regulator | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1001400 | 383 aa hypothetical protein | |||
1001405 | M | M.SheYLB09ORF4895P (17% identity) | M.AmaDORF287P | |
1001410 | 339 aa hypothetical protein | |||
1002545 | 66 aa hypothetical protein | |||
1002550 | M | M.AspG91ORFAP (100% identity) | GATC | M.AmaDDamP |
1002555 | cell division protein DamX | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
1000830 | 344 aa hypothetical protein | |||
1000835 | R | SonZP2ORF5725P (34% identity) | AmaDMcrAP | |
1000840 | 50 aa hypothetical protein |